Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq17 188 1e-42 seq11 158 2e-33 seq19 127 4e-24 seq8 100 5e-16 >seq17 Length=605135 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || ||||| |||||||| ||||| ||||| || |||||||| || ||||| Sbjct 221945 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 222004 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || |||| || || |||||||| Sbjct 222005 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 222064 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||||| ||||||||||| | || || || Sbjct 222065 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 222124 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| ||||| || || |||||||| Sbjct 222125 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| || |||||||| || || || Sbjct 300015 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 300074 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || || || | |||||| || ||||| || || | || |||||||| || Sbjct 300075 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 300134 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| ||||||||||| | || || || Sbjct 300135 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 300194 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || |||||||||||||| ||||| |||||||| Sbjct 300195 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 300241 >seq11 Length=790822 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| || || ||||| || |||||||| |||||||| Sbjct 631736 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 631677 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||| | || || || ||||| Sbjct 631676 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 631617 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||||||| ||||| ||||| | || || || Sbjct 631616 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 631557 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || || |||||||| || |||||||| Sbjct 631556 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 631510 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| | || | || | ||| | |||| ||| || || ||||| || |||||| Sbjct 631964 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 631905 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||||| || ||||| || || Sbjct 631904 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 631845 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| || || || ||||| ||||| | || || || Sbjct 631844 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 631785 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 631784 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 631738 >seq19 Length=580969 Score = 127 bits (140), Expect = 4e-24 Identities = 871/1377 (63%), Gaps = 46/1377 (3%) Strand=Plus/Plus Query 30794 AATGGCGTTTGCAGCAGGCTTGCTTCTGCAG-TAATACATAAGCGTCTTGAGACCCTTCT 30852 ||||||||| | ||||||||| | | |||| || || || |||||||||||||||| Sbjct 519228 AATGGCGTTGGAGGCAGGCTTGGTAC-GCAGGTAGTAGGTACCGGTCTTGAGACCCTTCT 519286 Query 30853 TCCATGCATAGAACAGCATGGAAGACAT-TGACTTCATAGAG-GGCGCTGCAACGAAGAG 30910 |||| | ||||| |||| || | | || | || || ||||| | | | | Sbjct 519287 TCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGC--CAAAGGTAGGCGCCGAGAGGTGAAT 519344 Query 30911 GTTCATGCTCTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGT 30970 ||| | ||| | |||| | || | ||| ||||| || || | ||| |||| || Sbjct 519345 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 519404 Query 30971 CTTCATAGACAGCTCCCATGCGGTCTTGTAGATTGCCTTGA-GCTCAGGGTGGATGCCAA 31029 |||| | |||||| |||||||||||| ||||| || || ||||||| Sbjct 519405 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGG-GGATGCCG- 519462 Query 31030 TGACACGTT--GGATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCA 31087 | |||||| ||||||| || |||| || || || |||||||||| | ||| ||| Sbjct 519463 -GGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGTCGTTCCA 519521 Query 31088 CGTGCCACGAGCGATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGC 31147 | || | ||| ||| ||||| | | | ||| ||||| ||||||| || || Sbjct 519522 CAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGC 519581 Query 31148 AAGGGTCCGGCGGCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGC 31206 || || || ||| | || || ||| ||||| | ||| ||| | | ||| Sbjct 519582 GAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGA-AGCACTCGTTGAAGCCGA 519640 Query 31207 AGATTTGCGCGGTGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCT 31266 ||| || ||| || ||||||||||| | ||| ||||| || | | ||| | Sbjct 519641 GGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGT 519700 Query 31267 TCTTGACGCGCTCTTCGAGGGTCTTC----CAGTCAAGGC---GAGTTACCGGCTCGGTT 31319 |||| ||| |||| || ||| | | | || | ||| | ||| ||| Sbjct 519701 GCTTG--GCGATCTT----GGCCTTGAGCTCGGCCCAGTCCCAGAGGT-CCGAGGGGGTG 519753 Query 31320 CC--CCAGAGGTGATACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGAT 31377 | ||| | || ||||||| | |||| | || ||||| || || | |||| | Sbjct 519754 ACGCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTCGT 519813 Query 31378 GGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCT 31437 || ||||||| | || || ||||| || ||| | || || ||| || ||| Sbjct 519814 AGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGTCT 519873 Query 31438 CAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCAT-GCGCAGCTTG 31496 | ||||| | | |||||| ||| || ||| ||||| ||| | || || | Sbjct 519874 CGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GGCGTAGCCCATGATC 519932 Query 31497 AAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTAC-T 31555 | ||| |||| ||||||||||||||| | || || || || |||||||||| | Sbjct 519933 ATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGTTGGAT 519992 Query 31556 AGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGC 31615 | | ||||| | | |||| | ||| ||| ||| |||||| ||||||||| Sbjct 519993 CGACGG-GCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTCTTG-- 520049 Query 31616 CAGAAT--CTTCACGTGCTTGCGAAGGTCCTCAAAGTCGTA------GGCACCGTTCTTG 31667 |||| ||| || || | | || | |||||||| ||| || | | Sbjct 520050 CAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGTCG 520109 Query 31668 ACGTAGTTCTGGAGGACGAT-GCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGT 31726 | | || | ||||| |||| | |||| | || || ||| ||||| | | | Sbjct 520110 ATGAAGGTGGGGAGGGCGATCGAGGCCAA-GTTGCAGACAGCCACCTCGTCGGGGGCGCT 520168 Query 31727 GTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCAT 31786 ||| |||| |||||||| || | ||| || | ||||||||||| || ||| | Sbjct 520169 GTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTT 520228 Query 31787 GTTCTTCACGTTCACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGT 31846 | |||| ||| || ||||||| ||| | | | || |||| |||||| |||||| Sbjct 520229 GCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGA 520288 Query 31847 GATGATCATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGGA 31906 || || || | ||||| | | || |||||| ||| ||||| ||||||| Sbjct 520289 CTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGC 520348 Query 31907 CTCGTAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGACA 31966 ||||||||| || ||| ||| |||| | ||| || || | || ||||| || Sbjct 520349 CTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCA 520408 Query 31967 CTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTC 32026 ||| |||||| | ||||||||| || | | ||| || | ||||||||| || || Sbjct 520409 CTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATC 520468 Query 32027 GTTCAGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACG 32086 | || ||| | ||||| || || | | ||| || ||||| || ||||| Sbjct 520469 GGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTT 520528 Query 32087 TCGGAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAA 32143 ||||| ||||| || | || ||| | ||| ||||| | ||| | ||| || Sbjct 520529 GCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAA 520585 >seq8 Length=837966 Score = 100 bits (110), Expect = 5e-16 Identities = 360/554 (65%), Gaps = 37/554 (7%) Strand=Plus/Minus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| || || |||||||| ||||| ||||||||| || |||||||||||||| || Sbjct 244916 GTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACC 244857 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACG 10370 || || |||||||| |||| | ||| || ||||||| |||||| || || ||| Sbjct 244856 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGA--AGAAGATGCCTTCAACG 244799 Query 10371 CACACCCAGGCGACGAGGCGCTCTGCGAA---GGAGCGGTCG-CGCGAAAAGTATTTCG- 10425 | |||||||||| ||||| ||||| || ||| | | ||| | | ||| Sbjct 244798 GCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCTGA---TCCATCGC 244742 Query 10426 AG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTC---GAAGAGC 10481 || ||||| | || |||| ||| | ||||| ||||||| || || || |||| Sbjct 244741 AGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGC 244682 Query 10482 TTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTG 10541 | | |||||| |||| ||| | || | ||| || ||||| ||| | Sbjct 244681 TCGCGCTGCTCGGGCTCG---CGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAG 244625 Query 10542 TGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACT 10601 |||| | |||| | |||| || ||||||| ||| ||| || | | || Sbjct 244624 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCC------TCGGCGGCT 244571 Query 10602 T---CCTCGGCAAAGTTG------TTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCT 10652 | |||||| || || | | |||||||| | || || || ||| | Sbjct 244570 TGCACCTCGG---AGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCG 244514 Query 10653 GCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGC 10712 || |||||| |||||| |||| ||| |||||||| || | ||||| || || | | Sbjct 244513 GCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCC 244454 Query 10713 CAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCC 10772 ||||| | ||||| | || | || ||| || |||||||||| | || ||||| Sbjct 244453 CAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCC 244394 Query 10773 TTCTTGTACATCTG 10786 || |||||||| || Sbjct 244393 TTTTTGTACATTTG 244380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622088952440