Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 4e-14 >seq11 Length=790822 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || || |||||||||||| Sbjct 631739 ATACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCG 631680 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || ||||| || || || || ||||||||||||| || || || Sbjct 631679 GAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGT 631620 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | || | ||||||| || || Sbjct 631619 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCC 631560 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||| || ||||||||||| || ||||| ||||||||| Sbjct 631559 ACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 631509 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||| | |||||| || || || || ||||||||| | Sbjct 631928 TCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAA 631869 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||| ||||| ||||| || || || || || ||||| ||||| ||| | | Sbjct 631868 ATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTG 631809 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | || ||||| |||| || | ||| || || || || || || || Sbjct 631808 TCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACG 631749 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 631748 AAAATCTGCAT 631738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134261749524