Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq11 93.3 4e-14
>seq11
Length=790822
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || || ||||||||||||
Sbjct 631739 ATACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCG 631680
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || ||||| || || || || ||||||||||||| || || ||
Sbjct 631679 GAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGT 631620
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | || | ||||||| || ||
Sbjct 631619 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCC 631560
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | ||| || ||||||||||| || ||||| |||||||||
Sbjct 631559 ACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 631509
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || ||||||||||| ||| | |||||| || || || || ||||||||| |
Sbjct 631928 TCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAA 631869
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
||||| ||||| ||||| || || || || || ||||| ||||| ||| | |
Sbjct 631868 ATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTG 631809
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | ||||| | || ||||| |||| || | ||| || || || || || || ||
Sbjct 631808 TCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACG 631749
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 631748 AAAATCTGCAT 631738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134261749524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |