Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq19 540 2e-148
seq8 333 5e-86
>seq19
Length=580969
Score = 540 bits (598), Expect = 2e-148
Identities = 1434/2154 (67%), Gaps = 90/2154 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGG-GTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799
||||||| | || || || ||| | |||||| | ||||||||| | |||||||||||
Sbjct 519221 TGAACTGAATGGCGTTGGA-GGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 519279
Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859
|| | |||| ||| || |||||| | || |||| || ||| |
Sbjct 519280 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTG-----------GCCAAAGGTAG 519328
Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919
| || | || | |||||| ||||| |||| || ||| | | || || |||
Sbjct 519329 GCGCCG-AGAGGTGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCG 519387
Query 243920 GCCATGGTGATGAGGTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
|||||| ||||| | ||||||| ||| || || ||| |||||||||| |||||
Sbjct 519388 GCCATGTCGATGATGGCCTTCTGGCTGATCTCCCAGACG--GTCTTGTAGAGCTTCTTGA 519445
Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
| | ||||||| || | |||||| | || || ||| |||||| || |
Sbjct 519446 TGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCT 519505
Query 244038 GCATGTTATCGTTCCACAGGCCC------AAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091
||| | ||||||||||| ||| | | |||| ||| | |||| | | |
Sbjct 519506 TCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTC--GCGGAGCAACCAAGGG----T 519559
Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151
|||||||||| ||||| || | ||||| || ||| ||||| |||| || ||||
Sbjct 519560 TCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCT 519619
Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
||| || ||| || ||| || ||||| || || || |||||||| | | ||
Sbjct 519620 CGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCA 519679
Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
| || ||| | || |||||| | ||| | |||||||| ||||||||| |
Sbjct 519680 GAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGA 519739
Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331
| ||||| || ||| |||| ||||||| |||||||| |||| || |
Sbjct 519740 GGTCCGAGGGGG---------TGACGCCC-ACATGTCGTACTGCAGCTCACCCT-GCGAA 519788
Query 244332 CGGGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG 244390
|||| ||| |||||||| ||||| |||| |||| ||||||| || | |||
Sbjct 519789 GCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-CGATCG 519847
Query 244391 -TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGC 244448
||||| ||||||| |||||||||||||||||| | ||| | | || || |||| |
Sbjct 519848 CTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGA-GACGACGAGCCTCGG 519906
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| |||| | |||||| ||||||||| ||||||| || ||||| || ||||| |
Sbjct 519907 GAGACTCAAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATAC 519966
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
||||||| | ||| ||| ||||||| || ||| || |||||||| ||||| ||
Sbjct 519967 CGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGT 520026
Query 244569 CGATCACCTTGTTGAGGTT---GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625
|||| | |||||| ||||| || | || | || |||| ||| ||| | | |
Sbjct 520027 CGATGATCTTGTTAAGGTTCTTGCAGATGGCCTTGG---CGACCTCGTGCAGACGTTTGA 520083
Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685
|||||||| || || ||||| || | || | || | ||||||||
Sbjct 520084 AGTCGTAC--GT-------CTTGGCGACGGGG-TCG--ATGAAGGTGGGGAGGGCGATCG 520131
Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745
||||| ||||||||| |||||||| || | | | |||||| || |||||||||||| |
Sbjct 520132 AGGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACA 520191
Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805
||| ||||||||||||||| |||| || || ||| |||| ||| ||| ||||
Sbjct 520192 AGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCT 520251
Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865
||||||| |||||||| ||||||||| ||| | |||||| | || |||||| |
Sbjct 520252 TGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT 520311
Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925
| |||||||| || | || |||||| ||||||||||| ||| ||| ||
Sbjct 520312 TCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCT 520371
Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985
| |||||| ||| || || | |||||||||||| ||||||||||| ||
Sbjct 520372 CAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACC 520431
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||||| | || |||||||| ||||||||| ||||| | |||||| || | |||||
Sbjct 520432 AGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 520491
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
| || | || | | ||| ||| ||| |||||| | || || | || |||||||
Sbjct 520492 GCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGA 520551
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| |||||| ||||| | ||| | || | ||| ||||| ||||||||||| ||||
Sbjct 520552 CGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 520611
Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
|||| | | | || ||| |||||||| ||| || | ||||| || |||||
Sbjct 520612 GGTCGA----CGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTG 520667
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
| |||||||| || ||||||| || |||| | || | | |||| | |
Sbjct 520668 CTGACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGG 520727
Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341
|| | || |||||| ||||||||| | ||| || |||||| ||||| |||||
Sbjct 520728 CCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCA 520787
Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401
|| || ||| ||||||| ||| || ||||| || || ||||| || | ||| |
Sbjct 520788 TCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTA 520847
Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTAC 245461
| | |||||| || |||||| |||||| |||||||| ||| | || |||
Sbjct 520848 CCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAG 520907
Query 245462 GTCTGGAGCAGAGC-GTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGT 245520
|||| | | || ||||||| | ||||||||| | |||| | |||||| |
Sbjct 520908 GTCT-CAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCAT 520966
Query 245521 GTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGC 245578
||||||||| ||| || | || | || | ||| | ||||||||||||||||
Sbjct 520967 GTGCTGGGGACGCTC--TGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGC 521024
Query 245579 GTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGT 245638
|||||||| || ||| | |||| |||||| | || ||| ||| | ||||||
Sbjct 521025 GTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGC 521084
Query 245639 CTCTCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAGCCCTGA- 245696
|| ||||| | |||| ||||| ||| | || || | ||| || |||
Sbjct 521085 TGGTCCTTGTGCTCCATGAC-GACCTTGTAGGTGGCGTCCGAGATCATGGG-GCTGTGAC 521142
Query 245697 GCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCAC-ACCTCCGAGAACTTGGGG 245755
| ||| | | || ||||||| |||| || || || |||| || ||
Sbjct 521143 GGCCGTTCTTGGGGTTGACGTACTCGTAGAG-GTCCTGGACGACCTGGCTAAAGTTCTTC 521201
Query 245756 CTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCA--ACTTGCTGTAGTCGG 245813
|||| ||| |||| |||| ||| || || |||||||| | || || |||||| |
Sbjct 521202 TTGGTCTCCTTGTGCAAGTTGCTGATGGCGATACGCGCCGCGAGGAC-AGC-GTAGTCTG 521259
Query 245814 GGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGC-AGCTCGTCAATCTCG 245866
|||| ||||||||| ||| || ||| || | || |||| || | ||| | ||||
Sbjct 521260 GGTGGGTGGTGGTCTTGTAGGCGGCGGTCTCGG-CAGCAAGGTTGTCGAGCTCG 521312
>seq8
Length=837966
Score = 333 bits (368), Expect = 5e-86
Identities = 600/857 (70%), Gaps = 30/857 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||| ||||| || ||| |||||||||||| ||||| |||||
Sbjct 244374 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 244433
Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAA---AGTTTTTCCTC 42413
||||||| || |||||| || || || |||||| | ||| || ||
Sbjct 244434 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGACAACGAACGCCACTTTATC-TC 244492
Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473
| | | || |||||||||||||| || ||||| || ||||| |||||||| | |
Sbjct 244493 GCA--CGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAG 244550
Query 42474 AGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533
| |||| |||||||| | ||||| || ||||||||||| ||||||||
Sbjct 244551 CGTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 244610
Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593
|| |||||| | ||||| ||| ||| | || || |||| ||||| | || |||
Sbjct 244611 ATGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATTCGCGAGCCC 244670
Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653
| |||| | || || | ||| | ||||| || ||| | ||||| |||| ||
Sbjct 244671 GAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAGCC 244730
Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||||||||||| |||||| || | | | ||| || |||| |||| | || || ||
Sbjct 244731 GACTGGGCGCTGCGATGGATC-AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGC 244789
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| ||||||| || |||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 244790 CTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAA 244849
Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || ||| || |||||||| ||||||||||| ||||| |||||| | ||||| |
Sbjct 244850 GAAGCGCGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 244908
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| ||||| | ||||||||||||||||| ||| |||||||||| | |||| | |
Sbjct 244909 GTCTGCACACCGACTTTGCCTGCCTCCTCTTC---AGCCACCTCA---AGAAGCGCGCAC 244962
Query 42892 A---GGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| || | |||||||| | ||||| || |||||| ||||||| | |
Sbjct 244963 ACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGA 245022
Query 42949 CGCAGTCGCTGCCCGTGTC-CCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007
| | | | ||| |||| ||| |||| ||| ||| |||| ||||||||||
Sbjct 245023 C-TACTGCCATCCCCTGTCGCCTCCTCGGTATGTCGAGCGAGGCCATGCACAAGTACATC 245081
Query 43008 CAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCG--CCTCTACAACACG 43064
||||||||||||| | | || || | | | || | ||| | |||| | |
Sbjct 245082 AAGTACGTCGCCGATCGCTTGCTCGTTTC-GCTCGG--AAATCCGGTTCACTACGGCGAG 245138
Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124
||||| ||||| || ||| |||||||||| ||||| || ||||||||||||||||||
Sbjct 245139 AGCTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAG 245198
Query 43125 AAGCGCGTCGCCGACTA 43141
||| ||||| || ||
Sbjct 245199 AAGAAGGTCGCAGAGTA 245215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338881285520
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