Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq11 82.4 6e-11 >seq11 Length=790822 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || || || | ||||||||||||||||||||||| || | Sbjct 632193 ACCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGA 632134 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || || | || |||| ||||| || ||||| |||| ||||||||| || | Sbjct 632133 AAGAGTG-CGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAG 632075 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGC 34078 | | | ||| |||||| || || ||| | | | | |||| | || ||| Sbjct 632074 GGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGA 632015 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| ||| || || || || || || || || |||||||||||||| Sbjct 632014 CATCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 631966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062269341654