Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq19 179 4e-40 seq8 104 3e-17 >seq19 Length=580969 Score = 179 bits (198), Expect = 4e-40 Identities = 907/1423 (64%), Gaps = 38/1423 (3%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 |||||||| ||||| || | | ||||| |||| |||||| ||||| |||||||| Sbjct 519571 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 519630 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||| || | ||| || ||| ||||| ||||||||||| || | ||||| ||| Sbjct 519631 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 519690 Query 114035 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT 114091 || ||||| ||| | | || ||||||| || ||||||| || | | Sbjct 519691 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 519747 Query 114092 GTC-TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAA 114150 | | | | |||||| || |||| || ||| || || || ||||| || | | Sbjct 519748 GGGGTGACGC--CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTA 519805 Query 114151 TGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGAT 114209 |||||||| | ||| | || |||| ||| | | |||| ||||| || ||||| | Sbjct 519806 GGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTGGT 519864 Query 114210 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGT 114268 | || ||||| || || | | || | |||||| || ||||| ||| || Sbjct 519865 AGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGC 519924 Query 114269 CGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327 | || | || || | || || ||||| |||||||||| || || || || || | Sbjct 519925 C--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCG 519982 Query 114328 CATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATT 114384 ||| || || |||| || |||| ||||| || | || | ||||| | | | || Sbjct 519983 CATGTTGGA---TCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTT 520039 Query 114385 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGA 114442 || || ||| || |||| | || || || || || | | || | || | Sbjct 520040 AAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGC 520099 Query 114443 GTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 | | || ||| | | || |||||||| || |||| || || |||| ||| Sbjct 520100 GACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTC 520156 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 || | ||||||| ||||| || || ||||| || || | ||| |||||||| | Sbjct 520157 GTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAG 520216 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621 |||||| || || ||| |||| ||||||||||| || ||| | || | || || Sbjct 520217 GTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGT 520276 Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680 ||| || || |||| ||| || || | ||||| | || | | || | || ||| |||| Sbjct 520277 CTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGG 520335 Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 | || ||||| ||||||| ||||||| |||||||| || || | || | Sbjct 520336 CACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAG 520395 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 ||| || || || | ||||| | ||| ||||| | || || ||| || | || Sbjct 520396 CGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCT 520455 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 |||||||||| || || | |||||| || ||||||| || || || | || || | Sbjct 520456 TCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCT 520515 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || || | || | || || | || |||| |||||| || || | || Sbjct 520516 TGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGT 520575 Query 114921 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 | | || | | || ||| ||| |||||| || || | || ||| | Sbjct 520576 AAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGT 520635 Query 114978 TAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAATACG 115035 | || ||||| ||||| || | |||||| | | || || || || || ||| Sbjct 520636 TGAAGACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTA 520693 Query 115036 AGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 115095 || || | | || ||||||| | || ||||| || || ||| ||||| Sbjct 520694 GGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGAT 520753 Query 115096 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGAT 115155 || ||| | |||| || ||||||| || ||||||||||| |||| | | || Sbjct 520754 CATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGAC 520813 Query 115156 AAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 115215 |||||||| ||| | || || || ||||| |||||||||||||| || | || Sbjct 520814 GAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGC 520873 Query 115216 GTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTT 115274 ||| | || ||| ||| ||||| | ||||||||| | | || ||||| | Sbjct 520874 GTGTGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCT 520932 Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||||| ||||||| | ||| ||||| | ||||| ||||| Sbjct 520933 GGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 520975 >seq8 Length=837966 Score = 104 bits (114), Expect = 3e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| ||||| ||||| || |||||||| || || |||||| || || Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAA 126224 || || || || || || | ||||||||| || |||| ||||| ||| | | Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 244750 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| || |||||| | || || | || || |||| ||||| || || |||| Sbjct 244749 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 244690 Query 126285 AGAG 126288 |||| Sbjct 244689 AGAG 244686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353398393160