Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq19 179 4e-40
seq8 104 3e-17
>seq19
Length=580969
Score = 179 bits (198), Expect = 4e-40
Identities = 907/1423 (64%), Gaps = 38/1423 (3%)
Strand=Plus/Plus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974
|||||||| ||||| || | | ||||| |||| |||||| ||||| ||||||||
Sbjct 519571 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 519630
Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034
||| || | ||| || ||| ||||| ||||||||||| || | ||||| |||
Sbjct 519631 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 519690
Query 114035 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT 114091
|| ||||| ||| | | || ||||||| || ||||||| || | |
Sbjct 519691 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 519747
Query 114092 GTC-TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAA 114150
| | | | |||||| || |||| || ||| || || || ||||| || | |
Sbjct 519748 GGGGTGACGC--CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTA 519805
Query 114151 TGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGAT 114209
|||||||| | ||| | || |||| ||| | | |||| ||||| || ||||| |
Sbjct 519806 GGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTGGT 519864
Query 114210 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGT 114268
| || ||||| || || | | || | |||||| || ||||| ||| ||
Sbjct 519865 AGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGC 519924
Query 114269 CGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327
| || | || || | || || ||||| |||||||||| || || || || || |
Sbjct 519925 C--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCG 519982
Query 114328 CATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATT 114384
||| || || |||| || |||| ||||| || | || | ||||| | | | ||
Sbjct 519983 CATGTTGGA---TCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTT 520039
Query 114385 TAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGA 114442
|| || ||| || |||| | || || || || || | | || | || |
Sbjct 520040 AAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGC 520099
Query 114443 GTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501
| | || ||| | | || |||||||| || |||| || || |||| |||
Sbjct 520100 GACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTC 520156
Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561
|| | ||||||| ||||| || || ||||| || || | ||| |||||||| |
Sbjct 520157 GTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAG 520216
Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621
|||||| || || ||| |||| ||||||||||| || ||| | || | || ||
Sbjct 520217 GTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGT 520276
Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680
||| || || |||| ||| || || | ||||| | || | | || | || ||| ||||
Sbjct 520277 CTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGG 520335
Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740
| || ||||| ||||||| ||||||| |||||||| || || | || |
Sbjct 520336 CACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAG 520395
Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800
||| || || || | ||||| | ||| ||||| | || || ||| || | ||
Sbjct 520396 CGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCT 520455
Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860
|||||||||| || || | |||||| || ||||||| || || || | || || |
Sbjct 520456 TCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCT 520515
Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920
|| || || || | || | || || | || |||| |||||| || || | ||
Sbjct 520516 TGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGT 520575
Query 114921 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977
| | || | | || ||| ||| |||||| || || | || ||| |
Sbjct 520576 AAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGT 520635
Query 114978 TAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAATACG 115035
| || ||||| ||||| || | |||||| | | || || || || || |||
Sbjct 520636 TGAAGACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTA 520693
Query 115036 AGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 115095
|| || | | || ||||||| | || ||||| || || ||| |||||
Sbjct 520694 GGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGAT 520753
Query 115096 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGAT 115155
|| ||| | |||| || ||||||| || ||||||||||| |||| | | ||
Sbjct 520754 CATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGAC 520813
Query 115156 AAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 115215
|||||||| ||| | || || || ||||| |||||||||||||| || | ||
Sbjct 520814 GAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGC 520873
Query 115216 GTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTT 115274
||| | || ||| ||| ||||| | ||||||||| | | || ||||| |
Sbjct 520874 GTGTGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCT 520932
Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
||||| ||||||| | ||| ||||| | ||||| |||||
Sbjct 520933 GGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 520975
>seq8
Length=837966
Score = 104 bits (114), Expect = 3e-17
Identities = 171/244 (70%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| ||||| ||||| || |||||||| || || |||||| || ||
Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | || || || |||||||||||
Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAA 126224
|| || || || || || | ||||||||| || |||| ||||| ||| | |
Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 244750
Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284
||| || |||||| | || || | || || |||| ||||| || || ||||
Sbjct 244749 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 244690
Query 126285 AGAG 126288
||||
Sbjct 244689 AGAG 244686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353398393160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |