Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq19 414 1e-110 >seq19 Length=580969 Score = 414 bits (458), Expect = 1e-110 Identities = 1140/1722 (66%), Gaps = 55/1722 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| || || ||| || ||||||||| || | |||| | Sbjct 521047 TACAACTTCTTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAG 520988 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| || || || |||| ||||| |||||| |||| || |||||||| ||| Sbjct 520987 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGAC 520928 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || || | | | | | || |||| | | ||| | ||| ||| || Sbjct 520927 ATCGAGAGCGCCATTGAGACCTACAACCTCATGTCGCAAAAGTACTTTACACACGCCTCC 520868 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || |||||| || ||| | || ||||| ||||| | || Sbjct 520867 CCCACCCTCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACC 520808 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||| ||| || || | ||||| |||||| ||||| | ||||| Sbjct 520807 ATGAAGGACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCC 520748 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || || ||||| ||| ||||| | | || | || ||||||||||| Sbjct 520747 AAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATT 520688 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||||||||| || | |||||| |||| || |||||||| |||||||||||| | Sbjct 520687 GCCGGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACC 520628 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| ||||||||||| | | | ||| | || || | || | ||| Sbjct 520627 GCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAG 520568 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| ||||||| | ||| ||||||| || |||||||||||||| || | Sbjct 520567 CCATGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAG 520508 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | | ||| |||| ||||||||||| ||||||||||| || || || ||||| | ||| Sbjct 520507 GTGCGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTC 520448 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376 ||| | ||| || |||| || | || ||||| || || ||||| || | ||| | Sbjct 520447 GAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGC 520388 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA---G 94433 | | || | ||||| | | || | || ||||| | ||||| |||| | Sbjct 520387 TACGGCGACGAG-TTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCG 520329 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 | || | | || |||||| ||| | ||| | || ||| ||||| || Sbjct 520328 CACCGTCA---AGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGG 520272 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| |||| | | |||||| | | ||| |||| ||||||| || ||||||| Sbjct 520271 CAACCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGG 520212 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| |||| || |||||||||||||| ||||||| | | || |||||| | Sbjct 520211 CACCATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGT 520152 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA----GATGCCTACA 94669 ||||| || ||| ||| ||| ||| ||| |||| ||| | ||| | ||| | | Sbjct 520151 GGCTGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCAT-CGACCCCGTCGCCAAGA 520093 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTT 94727 || ||| |||| || |||| | ||| | || |||| || | Sbjct 520092 CG--TACGACTTCAAACG-TCTGCACGAGGT-----------CGCCAAGGCCATCTGCAA 520047 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGG--CGGAGAACTCA 94785 |||||| |||| | | ||||||| |||| |||||||||| ||||| || || || Sbjct 520046 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGA--TCC 519989 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || || || |||||||| ||||| ||||||||| | || ||||| | |||| Sbjct 519988 AACATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATC 519929 Query 94846 ATGCGTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 ||| | || | ||| || ||| ||| || || | || || | || ||||| | Sbjct 519928 ATG-GGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC 519870 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCAC 94963 ||| || ||| || | | | ||| | | |||| ||| | ||||| | Sbjct 519869 CATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAG-CAGCACGGC---ACCT 519814 Query 94964 ACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 |||| | | | ||| ||||| ||| | ||||| | |||| |||| | | ||| Sbjct 519813 ACGAGACCTACGCCGGCTCGCCCGCTTCG--CAGGGTGAGCTGCAGTACGACATGT-GGG 519757 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACAC 95079 || | ||||||| || | ||||||| ||||| | || || | ||| ||| Sbjct 519756 CGTCACCCCCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGA--TCGCCAAGCAC 519699 Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 ||| || ||| |||| || | || ||||||||||| ||||| || |||||||| Sbjct 519698 GGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTC 519639 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 ||| |||||||| ||||| || | ||| |||||| | ||| | || ||||||||| Sbjct 519638 GGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCC 519579 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGT 95257 || || |||| || | ||| | || || || || |||| | |||| ||| Sbjct 519578 GGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCT--CGTCGAGCAGGGTCTGT 519521 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCG 95316 || |||| | | ||||||| | | ||| | | ||| ||| |||||||| | || Sbjct 519520 GGAACGACACGATGAAGAACC-GCATCATCGCTCACGGCGGTTCCATCCAGAACGTGCCC 519462 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTG 95376 || || || ||||||| ||||||||||||||| ||||||||| ||| | Sbjct 519461 GGCATCCCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCC 519402 Query 95377 ATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 || ||||| || |||| ||| || | |||||||||||| Sbjct 519401 ATCATCGACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAG 519360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723033030920