Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq19 414 1e-110
>seq19
Length=580969
Score = 414 bits (458), Expect = 1e-110
Identities = 1140/1722 (66%), Gaps = 55/1722 (3%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | | ||| | |||||| || || ||| || ||||||||| || | |||| |
Sbjct 521047 TACAACTTCTTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAG 520988
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| | ||||| || || || |||| ||||| |||||| |||| || |||||||| |||
Sbjct 520987 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGAC 520928
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897
|| || | | | | | || |||| | | ||| | ||| ||| ||
Sbjct 520927 ATCGAGAGCGCCATTGAGACCTACAACCTCATGTCGCAAAAGTACTTTACACACGCCTCC 520868
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| ||||| |||||||| || |||||| || ||| | || ||||| ||||| | ||
Sbjct 520867 CCCACCCTCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACC 520808
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| |||||| ||| || || | ||||| |||||| ||||| | |||||
Sbjct 520807 ATGAAGGACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCC 520748
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| ||| || || ||||| ||| ||||| | | || | || |||||||||||
Sbjct 520747 AAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATT 520688
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||||||||| || | |||||| |||| || |||||||| |||||||||||| |
Sbjct 520687 GCCGGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACC 520628
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| |||||||| ||||||||||| | | | ||| | || || | || | |||
Sbjct 520627 GCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAG 520568
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||| ||||||| | ||| ||||||| || |||||||||||||| || |
Sbjct 520567 CCATGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAG 520508
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
| | | ||| |||| ||||||||||| ||||||||||| || || || ||||| | |||
Sbjct 520507 GTGCGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTC 520448
Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376
||| | ||| || |||| || | || ||||| || || ||||| || | ||| |
Sbjct 520447 GAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGC 520388
Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA---G 94433
| | || | ||||| | | || | || ||||| | ||||| |||| |
Sbjct 520387 TACGGCGACGAG-TTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCG 520329
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
| || | | || |||||| ||| | ||| | || ||| ||||| ||
Sbjct 520328 CACCGTCA---AGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGG 520272
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| |||| |||| | | |||||| | | ||| |||| ||||||| || |||||||
Sbjct 520271 CAACCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGG 520212
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
|||||| |||| || |||||||||||||| ||||||| | | || |||||| |
Sbjct 520211 CACCATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGT 520152
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA----GATGCCTACA 94669
||||| || ||| ||| ||| ||| ||| |||| ||| | ||| | ||| | |
Sbjct 520151 GGCTGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCAT-CGACCCCGTCGCCAAGA 520093
Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTT 94727
|| ||| |||| || |||| | ||| | || |||| || |
Sbjct 520092 CG--TACGACTTCAAACG-TCTGCACGAGGT-----------CGCCAAGGCCATCTGCAA 520047
Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGG--CGGAGAACTCA 94785
|||||| |||| | | ||||||| |||| |||||||||| ||||| || || ||
Sbjct 520046 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGA--TCC 519989
Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845
||| || || || |||||||| ||||| ||||||||| | || ||||| | ||||
Sbjct 519988 AACATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATC 519929
Query 94846 ATGCGTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904
||| | || | ||| || ||| ||| || || | || || | || ||||| |
Sbjct 519928 ATG-GGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC 519870
Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCAC 94963
||| || ||| || | | | ||| | | |||| ||| | ||||| |
Sbjct 519869 CATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAG-CAGCACGGC---ACCT 519814
Query 94964 ACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021
|||| | | | ||| ||||| ||| | ||||| | |||| |||| | | |||
Sbjct 519813 ACGAGACCTACGCCGGCTCGCCCGCTTCG--CAGGGTGAGCTGCAGTACGACATGT-GGG 519757
Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACAC 95079
|| | ||||||| || | ||||||| ||||| | || || | ||| |||
Sbjct 519756 CGTCACCCCCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGA--TCGCCAAGCAC 519699
Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139
||| || ||| |||| || | || ||||||||||| ||||| || ||||||||
Sbjct 519698 GGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTC 519639
Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199
||| |||||||| ||||| || | ||| |||||| | ||| | || |||||||||
Sbjct 519638 GGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCC 519579
Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGT 95257
|| || |||| || | ||| | || || || || |||| | |||| |||
Sbjct 519578 GGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCT--CGTCGAGCAGGGTCTGT 519521
Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCG 95316
|| |||| | | ||||||| | | ||| | | ||| ||| |||||||| | ||
Sbjct 519520 GGAACGACACGATGAAGAACC-GCATCATCGCTCACGGCGGTTCCATCCAGAACGTGCCC 519462
Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTG 95376
|| || || ||||||| ||||||||||||||| ||||||||| ||| |
Sbjct 519461 GGCATCCCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCC 519402
Query 95377 ATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418
|| ||||| || |||| ||| || | ||||||||||||
Sbjct 519401 ATCATCGACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAG 519360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723033030920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |