Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq19 293 2e-74
seq11 116 4e-21
seq8 114 1e-20
seq17 107 2e-18
>seq19
Length=580969
Score = 293 bits (324), Expect = 2e-74
Identities = 1082/1650 (66%), Gaps = 60/1650 (4%)
Strand=Plus/Plus
Query 152838 ATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATG-CGTTTTGCCTTCATCTCCCAGGC 152896
|||||||| ||||||||| ||||| || || ||| | || || || ||||||||| |
Sbjct 519367 ATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCCTTCTGGCTG-ATCTCCCAGAC 519425
Query 152897 GGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAGAGCCCTT 152956
||| ||||| | || || | || || || || || | |||||| || || ||
Sbjct 519426 GGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCC 519485
Query 152957 GTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTCAGTTTAATGAGGTCAT 153015
||| || | || ||| ||| | | | ||| ||| | | | | ||| ||
Sbjct 519486 GTGAGCGATGAT-GCGGTTCTTCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTCGC 519544
Query 153016 CGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACAT 153075
|| ||| | |||| ||||| || ||||| || || | ||| || | | | || | |
Sbjct 519545 GGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGT 519604
Query 153076 TGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCG 153135
|| ||| |||| || ||| | ||||| ||| || || ||| || | ||||| |
Sbjct 519605 TGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGG 519664
Query 153136 GCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACG 153195
||||| || | || | || || |||| |||||| || | | |||| | |
Sbjct 519665 GCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCT 519724
Query 153196 CCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTC 153255
| ||| ||||| || |||| || || || ||||||||||||||| | | | ||
Sbjct 519725 CGGCCCAGTCCCAGAGGTCCGAGGGGGTGACGC-CCACATGTCGTACTGCAGCTCACCCT 519783
Query 153256 GACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGC 153315
| ||||| |||||| | || |||| |||||| | || ||||| ||||| |
Sbjct 519784 GCGAAGCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-C 519842
Query 153316 TAGC-CTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC-GC 153373
| | |||||| ||| | | ||| ||||| ||| ||| || |||||| || | ||
Sbjct 519843 GATCGCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGA-CGACGAGC 519901
Query 153374 TTCTTCGCTCTCGTACGGCAT-GCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432
|| ||| | ||| | || || | || ||||||||||| |||||||||| ||
Sbjct 519902 CTCGGGAGACTCAAA-GGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACAC 519960
Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGAT 153492
||| |||||||| || || | |||| || | || | | | ||| |||| |
Sbjct 519961 CGATACCGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGT 520020
Query 153493 TGCGATCGATAATTTTGTTGAGGTTGC-GCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551
|| ||||| || ||||| ||||| ||| | | || | | | | | ||
Sbjct 520021 TGATGTCGATGATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGT 520079
Query 153552 TCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTC----ACGGCAATAGACGC 153607
| ||| || || ||| | | ||||| | || || | | ||| || || ||
Sbjct 520080 TTGAAGTCGTACGTCTT---GGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGC 520135
Query 153608 CAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT 153667
|| || ||||| ||| ||| |||| | ||||||||| | ||||||| ||| | |||
Sbjct 520136 CAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTT 520195
Query 153668 GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAA 153727
| ||| || ||| ||| | || | ||| ||||| ||||| || || || ||| |
Sbjct 520196 GGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTA 520255
Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCT 153786
||| ||| | || |||||||||| |||| |||| ||| | || || | ||
Sbjct 520256 GAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCT 520314
Query 153787 GCGCTCGCACCCGCTGCCGATAGC--GGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTC 153844
| || || | ||| | || |||||||| |||||| |||||||| || |||||
Sbjct 520315 GGGCCTTGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTC 520372
Query 153845 AAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCA 153904
||||||||||||||||||||| ||||||||||| |||| | || ||||| ||||||||
Sbjct 520373 AAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCA 520432
Query 153905 CATATCGT-CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGA 153963
||| | || | ||| | |||||| ||||| ||||||||||| ||||| | ||
Sbjct 520433 GTCGCCGTTCTGC-TCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 520491
Query 153964 GGTCGCGCGCCTTGCAA-TCCTCCGCGCCCATGTTGCGTTTCAGA--TTGAGCACGCTAT 154020
| || || || ||| |||||| ||| ||| || | || | ||| | |
Sbjct 520492 GCTCTCGGGCAC-GCACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAA 520548
Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077
||| ||| | |||||| || |||| ||| | ||| | |||||| |||||| || |
Sbjct 520549 AGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCAC 520608
Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137
|||| ||||||| ||| | | |||||||||||||| | |||||| | | ||| |||
Sbjct 520609 CCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTG 520667
Query 154138 C-GGTGCCGTTGGT--CG--AAT---TGATCTTGCTGCCGCGGGCGCGCACTTGATGCAC 154189
| | |||||||| || ||| || | | |||||||| ||| | |||
Sbjct 520668 CTGACACCGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCAGTGGAT---- 520720
Query 154190 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCC--CAGCGTCCTG 154247
||| | ||| || || ||| || ||| || || || ||| || | ||||| |
Sbjct 520721 GTTGAGGCCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCG 520778
Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307
|||||||| ||||| ||||| | | || | ||| ||||| | | || ||
Sbjct 520779 TAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGG- 520837
Query 154308 ATGC-GCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366
||| | || || || ||||||||||| ||||| ||||| ||||| |||
Sbjct 520838 GTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACAT 520897
Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426
| | ||| || || |||||| ||||| || | |||||| || |||| ||||| ||
Sbjct 520898 GAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACG 520957
Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGAC 154456
||||||||||||||| ||||| || |||||
Sbjct 520958 CATGAGCATGTGCTGGGGACGCTCTGCGAC 520987
>seq11
Length=790822
Score = 116 bits (128), Expect = 4e-21
Identities = 146/197 (74%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||| ||| | || || |||||| || || || |||| |
Sbjct 631703 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 631644
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||| || || || || ||||| || ||||| ||| | || | || |
Sbjct 631643 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCT-TGAATCTTGGCCTTGAC 631585
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| | | ||||||| ||||||||||||| || | ||| ||||| |||||||| |
Sbjct 631584 GTTGT-CGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCT 631526
Query 138599 TTACAAAAATCTGCATG 138615
| ||||| |||||||||
Sbjct 631525 TGACAAAGATCTGCATG 631509
Score = 102 bits (112), Expect = 8e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| ||||||||||||||| | |||||| ||||||||| || ||||| | |
Sbjct 631929 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 631870
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
|| || ||||| ||||| || || ||||| || ||||| ||| || ||| | |||
Sbjct 631869 AATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATT 631810
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
|| | | ||||| | ||||| ||||| | || | ||| || || || || || || |
Sbjct 631809 GT-CGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGA 631751
Query 138602 CAAAAATCTGCAT 138614
| |||||||||||
Sbjct 631750 CGAAAATCTGCAT 631738
>seq8
Length=837966
Score = 114 bits (126), Expect = 1e-20
Identities = 320/483 (66%), Gaps = 21/483 (4%)
Strand=Plus/Plus
Query 52365 TGGATCGAGAGCGACAC---CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTC 52421
|||||| ||||||| |||||| | |||||||| | || ||||| ||| ||
Sbjct 244746 TGGATC---AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTT 244802
Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481
|| ||| | || || |||||| ||| ||| ||||||| | | || | | || |
Sbjct 244803 GAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 244862
Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541
|||||||| || || ||| ||||||| | || |||||||||||||| |||||||| |||
Sbjct 244863 ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAGGTCTGCACACCGAC 244922
Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG----GATTCGGACACGAT 52597
||||| |||||| || | || | | | || || | | ||||||| |
Sbjct 244923 TTTGCCTGCCTCCTCTTC-AGCCAC------CTCAAGAAGCGCGCACACCCGGACACCGT 244975
Query 52598 CCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCT-GC 52656
|| | || ||| | || || | ||||| |||||| || || | || | |
Sbjct 244976 GCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGACTACTGCCATCCC 245035
Query 52657 CGGTCGAGCTGCTGGGCATGAACGCGC-AGTCCATGTGCGAGTACATCGAGTTTGTGGCG 52715
| |||| || || || ||| || || || ||||| | |||||||| ||| || ||
Sbjct 245036 CTGTCG-CCTCCTCGGTATG-TCGAGCGAGGCCATGCACAAGTACATCAAGTACGTCGCC 245093
Query 52716 GATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAG 52775
||||| || | || |||||| | || ||| | || || ||||| ||
Sbjct 245094 GATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGGCGAGAGCTGCCCGTTCGAT 245153
Query 52776 TTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAG 52835
|| ||| | ||||| || | || || ||||||||||||||||||||| |||| |||
Sbjct 245154 TTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAGAAGAAGGTCGCAGAG 245213
Query 52836 TAT 52838
|||
Sbjct 245214 TAT 245216
>seq17
Length=605135
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||||||| || || | | |||||||| || ||||||||||||
Sbjct 221945 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 222004
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||||||| || || || | | |||| || ||||| || || || ||
Sbjct 222005 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 222064
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 222065 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 222124
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || || || || ||||| || ||||| ||||||||
Sbjct 222125 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262232511440
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