Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19 293 2e-74 seq11 116 4e-21 seq8 114 1e-20 seq17 107 2e-18 >seq19 Length=580969 Score = 293 bits (324), Expect = 2e-74 Identities = 1082/1650 (66%), Gaps = 60/1650 (4%) Strand=Plus/Plus Query 152838 ATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATG-CGTTTTGCCTTCATCTCCCAGGC 152896 |||||||| ||||||||| ||||| || || ||| | || || || ||||||||| | Sbjct 519367 ATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCCTTCTGGCTG-ATCTCCCAGAC 519425 Query 152897 GGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAGAGCCCTT 152956 ||| ||||| | || || | || || || || || | |||||| || || || Sbjct 519426 GGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCC 519485 Query 152957 GTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTCAGTTTAATGAGGTCAT 153015 ||| || | || ||| ||| | | | ||| ||| | | | | ||| || Sbjct 519486 GTGAGCGATGAT-GCGGTTCTTCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTCGC 519544 Query 153016 CGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACAT 153075 || ||| | |||| ||||| || ||||| || || | ||| || | | | || | | Sbjct 519545 GGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGT 519604 Query 153076 TGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCG 153135 || ||| |||| || ||| | ||||| ||| || || ||| || | ||||| | Sbjct 519605 TGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGG 519664 Query 153136 GCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACG 153195 ||||| || | || | || || |||| |||||| || | | |||| | | Sbjct 519665 GCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCT 519724 Query 153196 CCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTC 153255 | ||| ||||| || |||| || || || ||||||||||||||| | | | || Sbjct 519725 CGGCCCAGTCCCAGAGGTCCGAGGGGGTGACGC-CCACATGTCGTACTGCAGCTCACCCT 519783 Query 153256 GACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGC 153315 | ||||| |||||| | || |||| |||||| | || ||||| ||||| | Sbjct 519784 GCGAAGCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-C 519842 Query 153316 TAGC-CTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC-GC 153373 | | |||||| ||| | | ||| ||||| ||| ||| || |||||| || | || Sbjct 519843 GATCGCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGA-CGACGAGC 519901 Query 153374 TTCTTCGCTCTCGTACGGCAT-GCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 || ||| | ||| | || || | || ||||||||||| |||||||||| || Sbjct 519902 CTCGGGAGACTCAAA-GGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACAC 519960 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGAT 153492 ||| |||||||| || || | |||| || | || | | | ||| |||| | Sbjct 519961 CGATACCGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGT 520020 Query 153493 TGCGATCGATAATTTTGTTGAGGTTGC-GCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551 || ||||| || ||||| ||||| ||| | | || | | | | | || Sbjct 520021 TGATGTCGATGATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGT 520079 Query 153552 TCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTC----ACGGCAATAGACGC 153607 | ||| || || ||| | | ||||| | || || | | ||| || || || Sbjct 520080 TTGAAGTCGTACGTCTT---GGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGC 520135 Query 153608 CAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT 153667 || || ||||| ||| ||| |||| | ||||||||| | ||||||| ||| | ||| Sbjct 520136 CAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTT 520195 Query 153668 GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAA 153727 | ||| || ||| ||| | || | ||| ||||| ||||| || || || ||| | Sbjct 520196 GGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTA 520255 Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCT 153786 ||| ||| | || |||||||||| |||| |||| ||| | || || | || Sbjct 520256 GAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCT 520314 Query 153787 GCGCTCGCACCCGCTGCCGATAGC--GGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTC 153844 | || || | ||| | || |||||||| |||||| |||||||| || ||||| Sbjct 520315 GGGCCTTGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTC 520372 Query 153845 AAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCA 153904 ||||||||||||||||||||| ||||||||||| |||| | || ||||| |||||||| Sbjct 520373 AAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCA 520432 Query 153905 CATATCGT-CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGA 153963 ||| | || | ||| | |||||| ||||| ||||||||||| ||||| | || Sbjct 520433 GTCGCCGTTCTGC-TCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 520491 Query 153964 GGTCGCGCGCCTTGCAA-TCCTCCGCGCCCATGTTGCGTTTCAGA--TTGAGCACGCTAT 154020 | || || || ||| |||||| ||| ||| || | || | ||| | | Sbjct 520492 GCTCTCGGGCAC-GCACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAA 520548 Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077 ||| ||| | |||||| || |||| ||| | ||| | |||||| |||||| || | Sbjct 520549 AGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCAC 520608 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 |||| ||||||| ||| | | |||||||||||||| | |||||| | | ||| ||| Sbjct 520609 CCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTG 520667 Query 154138 C-GGTGCCGTTGGT--CG--AAT---TGATCTTGCTGCCGCGGGCGCGCACTTGATGCAC 154189 | | |||||||| || ||| || | | |||||||| ||| | ||| Sbjct 520668 CTGACACCGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCAGTGGAT---- 520720 Query 154190 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCC--CAGCGTCCTG 154247 ||| | ||| || || ||| || ||| || || || ||| || | ||||| | Sbjct 520721 GTTGAGGCCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCG 520778 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 |||||||| ||||| ||||| | | || | ||| ||||| | | || || Sbjct 520779 TAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGG- 520837 Query 154308 ATGC-GCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366 ||| | || || || ||||||||||| ||||| ||||| ||||| ||| Sbjct 520838 GTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACAT 520897 Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426 | | ||| || || |||||| ||||| || | |||||| || |||| ||||| || Sbjct 520898 GAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACG 520957 Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 ||||||||||||||| ||||| || ||||| Sbjct 520958 CATGAGCATGTGCTGGGGACGCTCTGCGAC 520987 >seq11 Length=790822 Score = 116 bits (128), Expect = 4e-21 Identities = 146/197 (74%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || |||||| || || || |||| | Sbjct 631703 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 631644 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| || || || || ||||| || ||||| ||| | || | || | Sbjct 631643 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCT-TGAATCTTGGCCTTGAC 631585 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | ||||||| ||||||||||||| || | ||| ||||| |||||||| | Sbjct 631584 GTTGT-CGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCT 631526 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 631525 TGACAAAGATCTGCATG 631509 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | |||||| ||||||||| || ||||| | | Sbjct 631929 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 631870 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || || ||||| ||||| || || ||||| || ||||| ||| || ||| | ||| Sbjct 631869 AATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATT 631810 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||||| | ||||| ||||| | || | ||| || || || || || || | Sbjct 631809 GT-CGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGA 631751 Query 138602 CAAAAATCTGCAT 138614 | ||||||||||| Sbjct 631750 CGAAAATCTGCAT 631738 >seq8 Length=837966 Score = 114 bits (126), Expect = 1e-20 Identities = 320/483 (66%), Gaps = 21/483 (4%) Strand=Plus/Plus Query 52365 TGGATCGAGAGCGACAC---CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||| ||||||| |||||| | |||||||| | || ||||| ||| || Sbjct 244746 TGGATC---AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTT 244802 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 || ||| | || || |||||| ||| ||| ||||||| | | || | | || | Sbjct 244803 GAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 244862 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 |||||||| || || ||| ||||||| | || |||||||||||||| |||||||| ||| Sbjct 244863 ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAGGTCTGCACACCGAC 244922 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG----GATTCGGACACGAT 52597 ||||| |||||| || | || | | | || || | | ||||||| | Sbjct 244923 TTTGCCTGCCTCCTCTTC-AGCCAC------CTCAAGAAGCGCGCACACCCGGACACCGT 244975 Query 52598 CCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCT-GC 52656 || | || ||| | || || | ||||| |||||| || || | || | | Sbjct 244976 GCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGACTACTGCCATCCC 245035 Query 52657 CGGTCGAGCTGCTGGGCATGAACGCGC-AGTCCATGTGCGAGTACATCGAGTTTGTGGCG 52715 | |||| || || || ||| || || || ||||| | |||||||| ||| || || Sbjct 245036 CTGTCG-CCTCCTCGGTATG-TCGAGCGAGGCCATGCACAAGTACATCAAGTACGTCGCC 245093 Query 52716 GATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAG 52775 ||||| || | || |||||| | || ||| | || || ||||| || Sbjct 245094 GATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGGCGAGAGCTGCCCGTTCGAT 245153 Query 52776 TTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAG 52835 || ||| | ||||| || | || || ||||||||||||||||||||| |||| ||| Sbjct 245154 TTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAGAAGAAGGTCGCAGAG 245213 Query 52836 TAT 52838 ||| Sbjct 245214 TAT 245216 >seq17 Length=605135 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||||||| || || | | |||||||| || |||||||||||| Sbjct 221945 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 222004 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| || || || | | |||| || ||||| || || || || Sbjct 222005 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 222064 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | |||||| | ||||| ||| Sbjct 222065 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 222124 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || ||||| || ||||| |||||||| Sbjct 222125 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262232511440