Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq19 188 9e-43 seq8 105 8e-18 >seq19 Length=580969 Score = 188 bits (208), Expect = 9e-43 Identities = 909/1423 (64%), Gaps = 38/1423 (3%) Strand=Plus/Plus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 |||||||| ||||| || | | |||||||||| |||||| ||||| |||||||| Sbjct 519571 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 519630 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||| || | ||| || || ||||| ||||||||||| || | ||||| |||| Sbjct 519631 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 519690 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 || ||||| | || ||||||| || ||||||| || | | | Sbjct 519691 CGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAGGGG 519750 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | ||||||| || |||| || ||| || || || ||||| || | | ||| Sbjct 519751 GTGACG-CCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTC 519809 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGATACAT 116174 || || | ||| | || |||| ||| | | |||| ||||| || ||||| || || Sbjct 519810 TCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTGGTAGAT 519868 Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGACGGC 116233 ||||| || || | | || | |||||| || ||||| ||| || | | Sbjct 519869 GGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGCC--C 519926 Query 116234 ACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292 | | || || | || || ||||| |||||||||| || || || || || | ||| Sbjct 519927 ATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATG 519986 Query 116293 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || |||| || |||| ||||| || | || | ||||| | | | || || Sbjct 519987 TTGGA---TCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGG 520043 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGAGTCT 116407 || ||| || |||| | || || || || || | | || | || | | | Sbjct 520044 TTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACG 520103 Query 116408 CT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 116466 || ||| | | || |||||||| || |||| || || |||| ||| || Sbjct 520104 GGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCG 520160 Query 116467 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 116526 | ||||||| ||||| || || ||||| || || | ||| |||||||| | |||| Sbjct 520161 GGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTC 520220 Query 116527 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586 || || || ||| |||| |||||||||||||| || | || | || ||||| Sbjct 520221 TTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCG 520280 Query 116587 GTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCG 116645 || || |||| ||| || || | ||| | | || | | || | || ||| ||||| || Sbjct 520281 GTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGCACG 520339 Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 ||||| ||||||| ||||||| ||||||||| || || ||| || | || Sbjct 520340 GCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTC-GCCGTAGCAGTCAGCGA 520398 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | || || || | || || | ||| ||||| | || || ||| |||| ||||| Sbjct 520399 GGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCA 520458 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 ||||||| || || | |||||| || ||||||| || || || | || || | | Sbjct 520459 TGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGC 520518 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | || || || | || | || || | || |||| |||||| || || | ||| | Sbjct 520519 CGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAA 520578 Query 116885 CCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 || | | || | |||| ||| |||||| || || | || || || Sbjct 520579 TGGCAAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGT 520635 Query 116939 TAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAATACG 116996 | || ||||| ||||| || | |||||| | | || || || || || ||| Sbjct 520636 TGAAGACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTA 520693 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 || | || | | || |||||||| | || ||||| || || ||| ||||| Sbjct 520694 GGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGAT 520753 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 || ||| | |||| || ||||||| |||||||||||||| |||| | | || Sbjct 520754 CATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGAC 520813 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 ||||||||| ||| | || || || ||||| |||||||||||||| || | || Sbjct 520814 GAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGC 520873 Query 117177 GTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTT 117235 ||| | || ||| ||| ||||| | ||||||||| | | | ||||| | Sbjct 520874 GTGTGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCT 520932 Query 117236 CCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 ||||| ||||||| | ||| ||||| | ||||| ||||| Sbjct 520933 GGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 520975 >seq8 Length=837966 Score = 105 bits (116), Expect = 8e-18 Identities = 172/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| ||||| ||||| || |||||||| || || |||||| ||||| Sbjct 244927 GCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCG 244868 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 244867 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATG 244808 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATC-AA 127697 || || || || || || | ||||||||||| |||| ||| | |||| | | Sbjct 244807 CCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG--CTTGTCGCTGA 244750 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || |||||| | || || | || || |||| ||||| || || |||| Sbjct 244749 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 244690 Query 127758 AGAG 127761 |||| Sbjct 244689 AGAG 244686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506992941320