Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq19 158 2e-33
>seq19
Length=580969
Score = 158 bits (174), Expect = 2e-33
Identities = 332/489 (68%), Gaps = 16/489 (3%)
Strand=Plus/Plus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
||||||||||||||||| ||||||| || | | ||| ||||| | |||||||| ||
Sbjct 519220 GTGAACTGAATGGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 519279
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | |||||| || | || | || | | | || | | | |
Sbjct 519280 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGCCAAAGGTAGGCGCCGAGAGG 519339
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|||||||| || ||||| ||| |||||||| | || || |||||||| | |||
Sbjct 519340 TGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATG 519399
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGGCAC 204087
|||| |||||| |||||||| || |||||| | | | ||| || || | | || |
Sbjct 519400 ATGGCCTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCT-TGATGCGGTCGGGGA- 519457
Query 204088 ATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCA---GTCTCATCCTCGTCT 204140
| || ||||| || ||| || ||| || || || | | || || |||| |
Sbjct 519458 ---TGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGT 519514
Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200
| | ||||| ||| | || ||||| || | || ||||| | | ||| |
Sbjct 519515 CGT---TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGA 519571
Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260
| || |||| ||||| | || | | | | |||| ||| | || ||||| |||||
Sbjct 519572 ACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGT 519631
Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320
|| ||||| |||||| ||| ||| |||||||||||||| || || || |||||||
Sbjct 519632 TGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGC 519691
Query 204321 GCACACCGT 204329
||| |||||
Sbjct 519692 GCAGACCGT 519700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154931635120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |