Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq19 158 2e-33 >seq19 Length=580969 Score = 158 bits (174), Expect = 2e-33 Identities = 332/489 (68%), Gaps = 16/489 (3%) Strand=Plus/Plus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||||||||||||| ||||||| || | | ||| ||||| | |||||||| || Sbjct 519220 GTGAACTGAATGGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 519279 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||||||| ||| ||||| | |||||| || | || | || | | | || | | | | Sbjct 519280 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGCCAAAGGTAGGCGCCGAGAGG 519339 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028 |||||||| || ||||| ||| |||||||| | || || |||||||| | ||| Sbjct 519340 TGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATG 519399 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGGCAC 204087 |||| |||||| |||||||| || |||||| | | | ||| || || | | || | Sbjct 519400 ATGGCCTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCT-TGATGCGGTCGGGGA- 519457 Query 204088 ATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCA---GTCTCATCCTCGTCT 204140 | || ||||| || ||| || ||| || || || | | || || |||| | Sbjct 519458 ---TGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGT 519514 Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200 | | ||||| ||| | || ||||| || | || ||||| | | ||| | Sbjct 519515 CGT---TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGA 519571 Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260 | || |||| ||||| | || | | | | |||| ||| | || ||||| ||||| Sbjct 519572 ACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGT 519631 Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320 || ||||| |||||| ||| ||| |||||||||||||| || || || ||||||| Sbjct 519632 TGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGC 519691 Query 204321 GCACACCGT 204329 ||| ||||| Sbjct 519692 GCAGACCGT 519700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154931635120