Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq15 412 4e-110
seq4 174 2e-38
seq19 123 3e-23
>seq15
Length=634981
Score = 412 bits (456), Expect = 4e-110
Identities = 785/1149 (68%), Gaps = 8/1149 (1%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||||| | |||||||| ||||| | || ||||| || || ||||| |||||||||
Sbjct 462356 TCACCCGAGAGAATGGCGGCCTGGACAGCGGCGCCGTAGGCAACAGCCTCGTCGGGGTTA 462297
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|||| || || || || ||||| || | || | | | | || | || |||
Sbjct 462296 ATCGACTTGTTGAGCTCACGGCCGTTGAAGAAGTCGGTGAGGAGCTTCTGCACCTTGGGG 462237
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || |||||||| | || || || | || || || ||||| |||
Sbjct 462236 ATACGAGTGGAACCACCGACGAGGACAATCTCGTGGACGGAGCCCTTGTCAATCTTCGAG 462177
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAGTTC 7248
|| || || || ||||| || || || | | || ||| | ||| || || ||
Sbjct 462176 TCGCGGAGGACCTTCTCGACGGGCTCGATGG-TGTGCGAGAAGAGGTCACCGCAAAGCTC 462118
Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308
||| ||||| |||||||| || || || ||||| || | ||| ||| | | || |||||
Sbjct 462117 CTCGAAACGAGCACGGGTGATCGAGGTGTAGAAGTCGATGCCCTCGAAGAGAGAGTCAAT 462058
Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368
|| ||||| || || || | ||| || | || ||||| || |||||||| || || ||
Sbjct 462057 CTCGATGGTGGTCTGGGCAGCCGACGAGAGGGTGCGCTTGGCACGCTCACAGGCGGTGCG 461998
Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428
| |||||| |||||||| | ||| || | || ||||| | || || || |||||
Sbjct 461997 GAGACGACGGAGGGCACGGGCGTTGGAGGTCAAGTCCTTCTTGTTCTTGCGCTTGAACTC 461938
Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
| |||||| | ||| | ||||| || |||||||||||||| || || ||
Sbjct 461937 CTGGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACC 461878
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
|| || || ||||| || |||||||| | || ||| | | | ||| ||||| || ||
Sbjct 461877 GGCAGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTGAGGAGCGAGACATCGAAGGT 461818
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608
||||||||||| ||| || ||||| |||||| | ||| | || | ||||| ||||||||
Sbjct 461817 ACCACCACCCAAGTCGAAGATGAGAACGTTCCTCTCGCCCTCAGTCTTCTTGTCGAGACC 461758
Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668
||| ||||| || || || || || || || || || || | ||| ||||| | ||
Sbjct 461757 GTAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATTCGCATCACGTTGAGGCCCGAGAT 461698
Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728
| | ||||| || || || || || ||||| ||||| |||||||| ||||| || ||
Sbjct 461697 GATACCGGCATCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCAGGGACGGTGAC 461638
Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788
||| || ||| |||| | |||||| || | || ||| | || ||| ||| ||
Sbjct 461637 GACGGCATCCTTGACGGTGCCACCGAGGTAGGCCTCGGCGGTCTCGCGCATCTTGAGGAG 461578
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848
||||||||| || |||||||| | | || ||| | ||||| || | || |
Sbjct 461577 AACCATCGACGAGATCTCTTCGGGGGTGAAGGTCTTCTTCTCACCCTTGTACTCGATACG 461518
Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908
||| || | | || | | ||| | || |||| | | ||| | ||||| |||
Sbjct 461517 GATC-TGAGGCTTGCCACCG-ACC-GTGACGACCTCGAAAGGCCAGTGCTTCATGTCGGA 461461
Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
|| |||| || ||||| | || || |||||||| || || || || |||||
Sbjct 461460 CTGAACCTCGGCATCGTCGAACTTGCGACCAATGAGACGCTTGGCGTCGAAGACGGTGTT 461401
Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028
| ||||||||| || |||||||| || ||||| ||||| ||||| || ||
Sbjct 461400 GTGGGGGTTCATAGCGACCTGGTTCTTGGCAGCGTCACCGATGAGACGCTC---CGAGTC 461344
Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088
|| || ||||| || || || || || || || || |||||||| ||||| | || ||
Sbjct 461343 GGTGAAGGCGACATATGAGGGAGTGGTGCGGTTACCCTGGTCGTTGGCAATGACCTCGAC 461284
Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|||||||||||||||||| | || ||||| || || || || | ||| |||||||| ||
Sbjct 461283 ACGGTCGTTTTGCCAGACGGCAACACACGAGTAGGTAGTACCAAGATCGATACCGATGGC 461224
Query 8149 TTGAGTCAT 8157
| |||||
Sbjct 461223 CTTGGTCAT 461215
>seq4
Length=1271980
Score = 174 bits (192), Expect = 2e-38
Identities = 466/702 (66%), Gaps = 39/702 (6%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||| | ||| || || || ||||| || || ||||||| ||
Sbjct 791524 TCAAAGTCCTCACCACCGAGGTGGGTGTCACCGGCGGTGGCAAGCACCTCAAAGACGCCC 791465
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||| | | ||||||||| || ||||||||||| || || | | | |
Sbjct 791464 GAGTCAATCGAGAGAAGCGAAACATCGAAAGTACCACCACCGAGATCGTAGACAATGATC 791405
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| || ||| |||| || ||| ||||||||||| ||||| || || || || || ||
Sbjct 791404 TGCGACTCGCCGTCCTT---CTTGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCG 791348
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | ||||| || ||| || || || || || | ||||| || || || |||||
Sbjct 791347 TTGACGATACGGAGGACGTTGAGACCGGCGATGGTACCGGCATCCTTGGTGGCCTGTCGC 791288
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||| ||||| || ||||| |||| ||||| || | |||||
Sbjct 791287 TGAGCGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTGTGGCCGAGG 791228
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||||| || |||||||| | |||| ||| || | | |
Sbjct 791227 TAAGCCTCGGCGGTCTCCTTCATCTTCTGGAGAACCATAGCCGAAACCTCCTC-GGGGTA 791169
Query 7817 AACTGTTTCGTTTCACCGTT-AAAATCAACT-----TCAATCATGGGTTTATCCGC---- 7866
|| ||| |||| ||||| | | | || || | || || | | |
Sbjct 791168 AAGACCTTCTTTTCGCCGTTGACGGTGACCTGGATGGCAGGCTTGCCCTTCTTCTCGACG 791109
Query 7867 AGC--ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCC 7924
||| ||||| ||| | | || ||| | ||| |||| | | ||
Sbjct 791108 AGCTTGAAGGGGAGGTGCTT----GGC--GTCCTTCTTGAGGTC--GGAC----TCGCCC 791061
Query 7925 GAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCT 7984
|||| | ||||| ||||||||||| ||||| | ||||||| ||||||| ||
Sbjct 791060 ---CACTTGCGACCGATGAGACGCTTTGCGTCAAAGATGGTGTTTTCGGGGTTCTGAGCG 791004
Query 7985 GTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTAC 8044
| |||||||| || ||||| |||| ||||| ||| ||||| ||||| |||
Sbjct 791003 GCCTGGTTCTTGGCAGCGTCTCCGACGAGACGCTCA------GGGGTAAAGGCGACATAC 790950
Query 8045 GATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAG 8104
|| ||||| |||| || ||||||||||| | || ||||| || ||| || || || |
Sbjct 790949 GAGGGGGTGATTCGGTTACCTTGGTCGTTGGTGATGATTTCGACACGGCCG-TTGACCTG 790891
Query 8105 A-CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
| ||||||| ||||| || || ||||| | ||| ||||| ||
Sbjct 790890 AGCGCCGACACACGAGTAGGTAGTTCCAAGATCGATACCAAT 790849
>seq19
Length=580969
Score = 123 bits (136), Expect = 3e-23
Identities = 276/408 (68%), Gaps = 6/408 (1%)
Strand=Plus/Minus
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
||||| ||||| |||||||| ||| | | ||| || || || | | | | ||| ||
Sbjct 158540 TCCTCGAAACGGGCACGGGTGATGTTGGCCTGGAAGTCGACACCCTGGAAGAGCGAGTCG 158481
Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366
| || | ||| || || | ||| || | || ||||| || |||||||| ||||
Sbjct 158480 ACCTCGACGGTGGTCTGGGTGACCGACGAGAGGGTGCGCTTGGCACGCTCACAGGCCGAG 158421
Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426
|| | ||| || | ||||| | || ||| || || || ||| | || || | ||||
Sbjct 158420 CGCAGACGGCGGACAGCACGGGCGTCACCCGAGATGTCGAGCTTGTTCTTGCGCTCAAAC 158361
Query 7427 TCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484
|| | |||||| |||| | | | | | ||||| || |||||||| | ||| || |
Sbjct 158360 TCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCAAGGTGGGTGT 158303
Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544
| || ||||| || ||||| | |||| ||| || ||||| | | ||| ||||| |
Sbjct 158302 CACCAGCGGTGGCCTTGACGGCGAAGACACCACCGGTGATGTTGAGGAGCGAGACATCGA 158243
Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTGTTCTTATCG 7603
| ||||| || || || || | ||||| |||||| | ||| ||| | || |||
Sbjct 158242 AAGTACCTCCGCCAAGATCGTAGATGAGGACGTTCTTCTCGGTCGACGAC-TTGGAGTCG 158184
Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651
|||||||| ||||| || || || || || || || || ||||| |||
Sbjct 158183 AGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 158136
Score = 118 bits (130), Expect = 1e-21
Identities = 301/455 (66%), Gaps = 6/455 (1%)
Strand=Plus/Minus
Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735
||||| || || || | || ||||| ||||| |||||||| ||||| || | ||| ||
Sbjct 157715 GCATCCTTGGTGGCAAGACGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGATGACAGCC 157656
Query 7736 TCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATC 7795
| | |||| | ||| || | | | || ||||| || ||||| ||||| || |||||
Sbjct 157655 TTCCTGACCTCCTTGCCAATCTTGGCCTCGGCGATCTCCTTCATCTTGGTGAGGACCATG 157596
Query 7796 GATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855
|| || ||||| | | | ||||| || || |||||| | | || || || | |
Sbjct 157595 GACGAGATCTCCTGGGGGGAGAACTGCTTGGTCTCACCGAGGTAGTTGACCTCGATGAAG 157536
Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915
|| | ||| | | ||| || | | | ||| | | ||| || | | |||
Sbjct 157535 GGGG-AGCCGT--CCTTGTCGATGACGGTGAAGGGCCAGTGCTGCATGTCCTTCTTGACG 157479
Query 7916 TGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975
| |||| | | || || |||||||| || || || || || | ||||||
Sbjct 157478 TCGGGGTCATCGTATCGGCGACCAATGAGACGCTTGGCGTCGAAGACGGTCTGCTTGGGG 157419
Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035
|||||||| | |||||||| || || || ||||| ||||| || |||| || ||
Sbjct 157418 TTCATGGCAGCCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GCTTTCGGTGAAA 157362
Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCG 8095
|||||||| || ||||| || || || || |||||||| || || || || || || |||
Sbjct 157361 GCGACGTAGGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACACGCTCG 157302
Query 8096 TTTTGCCAGACGCCGACGCACGAATACGTTGTTCC 8130
|| ||| ||||| || || || || || ||
Sbjct 157301 TTGACCCACCAACCGACACAGGAGTAGGTGGTACC 157267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132585642680
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