Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq15 412 4e-110 seq4 174 2e-38 seq19 123 3e-23 >seq15 Length=634981 Score = 412 bits (456), Expect = 4e-110 Identities = 785/1149 (68%), Gaps = 8/1149 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||||| | |||||||| ||||| | || ||||| || || ||||| ||||||||| Sbjct 462356 TCACCCGAGAGAATGGCGGCCTGGACAGCGGCGCCGTAGGCAACAGCCTCGTCGGGGTTA 462297 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || || || ||||| || | || | | | | || | || ||| Sbjct 462296 ATCGACTTGTTGAGCTCACGGCCGTTGAAGAAGTCGGTGAGGAGCTTCTGCACCTTGGGG 462237 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | || || || | || || || ||||| ||| Sbjct 462236 ATACGAGTGGAACCACCGACGAGGACAATCTCGTGGACGGAGCCCTTGTCAATCTTCGAG 462177 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAGTTC 7248 || || || || ||||| || || || | | || ||| | ||| || || || Sbjct 462176 TCGCGGAGGACCTTCTCGACGGGCTCGATGG-TGTGCGAGAAGAGGTCACCGCAAAGCTC 462118 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| |||||||| || || || ||||| || | ||| ||| | | || ||||| Sbjct 462117 CTCGAAACGAGCACGGGTGATCGAGGTGTAGAAGTCGATGCCCTCGAAGAGAGAGTCAAT 462058 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || ||||| || || || | ||| || | || ||||| || |||||||| || || || Sbjct 462057 CTCGATGGTGGTCTGGGCAGCCGACGAGAGGGTGCGCTTGGCACGCTCACAGGCGGTGCG 461998 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | |||||| |||||||| | ||| || | || ||||| | || || || ||||| Sbjct 461997 GAGACGACGGAGGGCACGGGCGTTGGAGGTCAAGTCCTTCTTGTTCTTGCGCTTGAACTC 461938 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 | |||||| | ||| | ||||| || |||||||||||||| || || || Sbjct 461937 CTGGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACC 461878 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || || ||||| || |||||||| | || ||| | | | ||| ||||| || || Sbjct 461877 GGCAGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTGAGGAGCGAGACATCGAAGGT 461818 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 ||||||||||| ||| || ||||| |||||| | ||| | || | ||||| |||||||| Sbjct 461817 ACCACCACCCAAGTCGAAGATGAGAACGTTCCTCTCGCCCTCAGTCTTCTTGTCGAGACC 461758 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || || || || || || || || || | ||| ||||| | || Sbjct 461757 GTAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATTCGCATCACGTTGAGGCCCGAGAT 461698 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | ||||| || || || || || ||||| ||||| |||||||| ||||| || || Sbjct 461697 GATACCGGCATCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCAGGGACGGTGAC 461638 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| || ||| |||| | |||||| || | || ||| | || ||| ||| || Sbjct 461637 GACGGCATCCTTGACGGTGCCACCGAGGTAGGCCTCGGCGGTCTCGCGCATCTTGAGGAG 461578 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 ||||||||| || |||||||| | | || ||| | ||||| || | || | Sbjct 461577 AACCATCGACGAGATCTCTTCGGGGGTGAAGGTCTTCTTCTCACCCTTGTACTCGATACG 461518 Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 ||| || | | || | | ||| | || |||| | | ||| | ||||| ||| Sbjct 461517 GATC-TGAGGCTTGCCACCG-ACC-GTGACGACCTCGAAAGGCCAGTGCTTCATGTCGGA 461461 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 || |||| || ||||| | || || |||||||| || || || || ||||| Sbjct 461460 CTGAACCTCGGCATCGTCGAACTTGCGACCAATGAGACGCTTGGCGTCGAAGACGGTGTT 461401 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | ||||||||| || |||||||| || ||||| ||||| ||||| || || Sbjct 461400 GTGGGGGTTCATAGCGACCTGGTTCTTGGCAGCGTCACCGATGAGACGCTC---CGAGTC 461344 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || ||||| || || || || || || || || |||||||| ||||| | || || Sbjct 461343 GGTGAAGGCGACATATGAGGGAGTGGTGCGGTTACCCTGGTCGTTGGCAATGACCTCGAC 461284 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||||||||||||||| | || ||||| || || || || | ||| |||||||| || Sbjct 461283 ACGGTCGTTTTGCCAGACGGCAACACACGAGTAGGTAGTACCAAGATCGATACCGATGGC 461224 Query 8149 TTGAGTCAT 8157 | ||||| Sbjct 461223 CTTGGTCAT 461215 >seq4 Length=1271980 Score = 174 bits (192), Expect = 2e-38 Identities = 466/702 (66%), Gaps = 39/702 (6%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || || ||||||| || Sbjct 791524 TCAAAGTCCTCACCACCGAGGTGGGTGTCACCGGCGGTGGCAAGCACCTCAAAGACGCCC 791465 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||| | | ||||||||| || ||||||||||| || || | | | | Sbjct 791464 GAGTCAATCGAGAGAAGCGAAACATCGAAAGTACCACCACCGAGATCGTAGACAATGATC 791405 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| |||| || ||| ||||||||||| ||||| || || || || || || Sbjct 791404 TGCGACTCGCCGTCCTT---CTTGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCG 791348 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | ||||| || ||| || || || || || | ||||| || || || ||||| Sbjct 791347 TTGACGATACGGAGGACGTTGAGACCGGCGATGGTACCGGCATCCTTGGTGGCCTGTCGC 791288 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||| ||||| || ||||| |||| ||||| || | ||||| Sbjct 791287 TGAGCGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTGTGGCCGAGG 791228 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||||| || |||||||| | |||| ||| || | | | Sbjct 791227 TAAGCCTCGGCGGTCTCCTTCATCTTCTGGAGAACCATAGCCGAAACCTCCTC-GGGGTA 791169 Query 7817 AACTGTTTCGTTTCACCGTT-AAAATCAACT-----TCAATCATGGGTTTATCCGC---- 7866 || ||| |||| ||||| | | | || || | || || | | | Sbjct 791168 AAGACCTTCTTTTCGCCGTTGACGGTGACCTGGATGGCAGGCTTGCCCTTCTTCTCGACG 791109 Query 7867 AGC--ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCC 7924 ||| ||||| ||| | | || ||| | ||| |||| | | || Sbjct 791108 AGCTTGAAGGGGAGGTGCTT----GGC--GTCCTTCTTGAGGTC--GGAC----TCGCCC 791061 Query 7925 GAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCT 7984 |||| | ||||| ||||||||||| ||||| | ||||||| ||||||| || Sbjct 791060 ---CACTTGCGACCGATGAGACGCTTTGCGTCAAAGATGGTGTTTTCGGGGTTCTGAGCG 791004 Query 7985 GTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTAC 8044 | |||||||| || ||||| |||| ||||| ||| ||||| ||||| ||| Sbjct 791003 GCCTGGTTCTTGGCAGCGTCTCCGACGAGACGCTCA------GGGGTAAAGGCGACATAC 790950 Query 8045 GATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAG 8104 || ||||| |||| || ||||||||||| | || ||||| || ||| || || || | Sbjct 790949 GAGGGGGTGATTCGGTTACCTTGGTCGTTGGTGATGATTTCGACACGGCCG-TTGACCTG 790891 Query 8105 A-CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||||||| ||||| || || ||||| | ||| ||||| || Sbjct 790890 AGCGCCGACACACGAGTAGGTAGTTCCAAGATCGATACCAAT 790849 >seq19 Length=580969 Score = 123 bits (136), Expect = 3e-23 Identities = 276/408 (68%), Gaps = 6/408 (1%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | | ||| || || || | | | | ||| || Sbjct 158540 TCCTCGAAACGGGCACGGGTGATGTTGGCCTGGAAGTCGACACCCTGGAAGAGCGAGTCG 158481 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | || | ||| || || | ||| || | || ||||| || |||||||| |||| Sbjct 158480 ACCTCGACGGTGGTCTGGGTGACCGACGAGAGGGTGCGCTTGGCACGCTCACAGGCCGAG 158421 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| || | ||||| | || ||| || || || ||| | || || | |||| Sbjct 158420 CGCAGACGGCGGACAGCACGGGCGTCACCCGAGATGTCGAGCTTGTTCTTGCGCTCAAAC 158361 Query 7427 TCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484 || | |||||| |||| | | | | | ||||| || |||||||| | ||| || | Sbjct 158360 TCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCAAGGTGGGTGT 158303 Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544 | || ||||| || ||||| | |||| ||| || ||||| | | ||| ||||| | Sbjct 158302 CACCAGCGGTGGCCTTGACGGCGAAGACACCACCGGTGATGTTGAGGAGCGAGACATCGA 158243 Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTGTTCTTATCG 7603 | ||||| || || || || | ||||| |||||| | ||| ||| | || ||| Sbjct 158242 AAGTACCTCCGCCAAGATCGTAGATGAGGACGTTCTTCTCGGTCGACGAC-TTGGAGTCG 158184 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 |||||||| ||||| || || || || || || || || ||||| ||| Sbjct 158183 AGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 158136 Score = 118 bits (130), Expect = 1e-21 Identities = 301/455 (66%), Gaps = 6/455 (1%) Strand=Plus/Minus Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735 ||||| || || || | || ||||| ||||| |||||||| ||||| || | ||| || Sbjct 157715 GCATCCTTGGTGGCAAGACGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGATGACAGCC 157656 Query 7736 TCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATC 7795 | | |||| | ||| || | | | || ||||| || ||||| ||||| || ||||| Sbjct 157655 TTCCTGACCTCCTTGCCAATCTTGGCCTCGGCGATCTCCTTCATCTTGGTGAGGACCATG 157596 Query 7796 GATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855 || || ||||| | | | ||||| || || |||||| | | || || || | | Sbjct 157595 GACGAGATCTCCTGGGGGGAGAACTGCTTGGTCTCACCGAGGTAGTTGACCTCGATGAAG 157536 Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915 || | ||| | | ||| || | | | ||| | | ||| || | | ||| Sbjct 157535 GGGG-AGCCGT--CCTTGTCGATGACGGTGAAGGGCCAGTGCTGCATGTCCTTCTTGACG 157479 Query 7916 TGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975 | |||| | | || || |||||||| || || || || || | |||||| Sbjct 157478 TCGGGGTCATCGTATCGGCGACCAATGAGACGCTTGGCGTCGAAGACGGTCTGCTTGGGG 157419 Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035 |||||||| | |||||||| || || || ||||| ||||| || |||| || || Sbjct 157418 TTCATGGCAGCCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GCTTTCGGTGAAA 157362 Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCG 8095 |||||||| || ||||| || || || || |||||||| || || || || || || ||| Sbjct 157361 GCGACGTAGGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACACGCTCG 157302 Query 8096 TTTTGCCAGACGCCGACGCACGAATACGTTGTTCC 8130 || ||| ||||| || || || || || || Sbjct 157301 TTGACCCACCAACCGACACAGGAGTAGGTGGTACC 157267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132585642680