Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq19 279 6e-70
seq13 136 5e-27
seq8 132 6e-26
>seq19
Length=580969
Score = 279 bits (308), Expect = 6e-70
Identities = 908/1392 (65%), Gaps = 30/1392 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| ||||| |||||||||| || | || || || |
Sbjct 520975 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 520916
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || ||||| | ||| || | ||||| | || ||||||||
Sbjct 520915 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 520857
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| || || || | || || ||||| | | | ||||| ||
Sbjct 520856 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 520797
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| ||| ||||||| |||| ||| |||| |||||| ||||| ||| || ||
Sbjct 520796 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 520737
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
||||||||| | ||||||| || | | || | || ||| ||||| ||
Sbjct 520736 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 520677
Query 111911 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 520676 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 520619
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||| | ||| ||||| | || | | || | || |||||||||||
Sbjct 520618 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 520562
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||| |||| || | |||||||| || | || ||||| || | ||||||| |||
Sbjct 520561 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 520502
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
||| || ||||||| ||| |||||| | || ||||||||||||||||| || ||| ||
Sbjct 520501 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 520442
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202
| ||| | ||||| ||| | || || || || ||||| ||| | || | ||
Sbjct 520441 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 520382
Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGGT 112261
|| |||||||| ||||||| ||||||| || | || || | ||| || ||
Sbjct 520381 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCA-AGCGCACCGT 520323
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| || | || | | ||| | || || ||| |||| || |||||||| || | || |
Sbjct 520322 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 520264
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
|| || ||||| || ||| ||||| ||||| || || ||||| | || ||||
Sbjct 520263 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 520204
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| | |||||| | || || || || | || | | | | || ||| |||||| |
Sbjct 520203 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 520144
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500
| ||| | || || ||||| ||||||| | | || || | | ||||| | || |
Sbjct 520143 GCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTACGACT 520084
Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560
|| || ||||| || | || | || || ||||| |||| | || || |
Sbjct 520083 TCAAACGTCTGCACGAGGTCGCCAAGGCCATCTGCAAGAACCTTAACAAGATCATCGACA 520024
Query 112561 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620
|| | |||||||| ||| || ||| ||| || ||| | |||||||| || |||
Sbjct 520023 TCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCCATCGGTA 519964
Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCGA 112678
|||||||||| ||||| || || | ||||| || | | || |||| ||||| ||
Sbjct 519963 TCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGG--GCTACGCCTTTGAGTCTCC 519906
Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC 112738
||| || |||| | || ||| || ||||| || || ||||||||||| || ||
Sbjct 519905 CGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTCGA-GC 519847
Query 112739 GA--GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796
|| || | ||| |||| || | || | || || |||| | || || || |||
Sbjct 519846 GATCGTGC-GAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCT 519788
Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGACTG 112855
|| || || | ||| || | || ||||||| || | || | | || |||||
Sbjct 519787 TCGCAGGGTGAGCTGCAGTACGACATGTGGG--CGTCACCCCCTCGGACCTCTGGGACTG 519730
Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
|| || ||||||| ||| || | ||||| || ||| ||| || | || ||
Sbjct 519729 GGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCC 519670
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
||||| || ||||| ||| || ||| | || || || ||||| || || |||||
Sbjct 519669 CATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACAC 519610
Query 112976 GACGAACATCTA 112987
| | ||||||||
Sbjct 519609 GTCCAACATCTA 519598
>seq13
Length=681008
Score = 136 bits (150), Expect = 5e-27
Identities = 240/347 (69%), Gaps = 6/347 (2%)
Strand=Plus/Plus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| ||||||||||||||||| |||||||||| ||| ||| ||||||| |||||
Sbjct 284185 TTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATG 284244
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
| || || || || | || || |||| | ||| || || || ||||||||||||
Sbjct 284245 CTGCCGTATCGCAGACTGTTCACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATC 284304
Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902
| ||||| | |||| ||| ||| ||| ||| | |||||| ||||| ||
Sbjct 284305 TCCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACG 284364
Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962
||| ||| ||||| || ||||| |||||||||| || | || ||| | || |
Sbjct 284365 TTCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATA 284424
Query 176963 CCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA---CTTG 177019
|| || || ||||||| || || || ||||| || || | |||||| || || ||||
Sbjct 284425 CCAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCAGTCCTTG 284484
Query 177020 CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAAT 177066
| | |||| ||| || ||||| ||||| || | ||||| ||
Sbjct 284485 GC-TTTCCTGCC--ACCGGCATTGTTGGCATCCTCGAGCTTGGGGAT 284528
>seq8
Length=837966
Score = 132 bits (146), Expect = 6e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233
|| || ||||| ||| |||| ||||| ||||| || ||||||||||| || ||||||
Sbjct 244770 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 244829
Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293
| | || | |||||||||||||| ||||||||||| |||||| |||||||||||||
Sbjct 244830 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 244889
Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| ||||| || ||||| || || ||| || |||||
Sbjct 244890 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGC 244927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742190499440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |