Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq19 226 3e-54 seq4 109 6e-19 seq8 84.2 3e-11 >seq19 Length=580969 Score = 226 bits (250), Expect = 3e-54 Identities = 1054/1647 (64%), Gaps = 46/1647 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||| | |||||| ||||| |||||| |||||| || || |||||||||||||| Sbjct 519345 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 519404 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||||| || |||||||| |||||||| | |||||||| ||||| ||| | Sbjct 519405 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGG 519464 Query 109620 GATGTTTTGAATAGAGCCACC---AGCCTTCACCATGAGATCCTTCATCTCTTTCGA-CC 109675 | ||| || || || || || ||| | | || | | ||||||| | ||| || Sbjct 519465 CACGTTCTGGATGGAACCGCCGTGAGCGATGA---TGCGGTTCTTCATCG-TGTCGTTCC 519520 Query 109676 AGAGACCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCA 109731 | ||||| || ||| ||| |||| | | | ||| ||||| || ||| Sbjct 519521 ACAGACCCTGCTCGACGAGCTCGCGGAGCAACCA-AGG---GTTCACCACCTGGAACTCA 519576 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 || || || || || ||||||||| | |||||| || ||||| ||||| ||| | Sbjct 519577 CCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAG 519636 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || ||||| || || || || |||||||||||||| | ||||| ||| || ||| Sbjct 519637 CCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGA 519696 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTG----CGTCCCAATCATAACGACCACTAAATTT 109907 || | | || | || || ||| || |||| || | | | | | Sbjct 519697 CCGTGC---TTGGCGATCTTG-GCCTTGAGCTCGGCCCAGTCCCAGAGGTC-CGAGG--- 519748 Query 109908 AGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAA 109967 | | || ||||||| || || || |||||| | ||| || || || | | Sbjct 519749 -GGGTGACG--CCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTA 519805 Query 109968 ACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATA 110027 ||||||| | || | || |||| |||| | || ||| || || || || || Sbjct 519806 GGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTA 519865 Query 110028 CATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG-GAAGAC 110086 || ||||| || ||||| | || | | |||| ||| | | || |||| | || | Sbjct 519866 GATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGCC 519925 Query 110087 CACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146 || | | | || | || || |||||||| ||||||| ||| ||||| || || || Sbjct 519926 CATGATCA-TGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCA 519984 Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206 |||| || || || || || |||||||| ||||| |||||||| | || || | Sbjct 519985 TGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGT 520044 Query 110207 TCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCT 110266 |||| | | ||| | || || || || | | | ||| |||| || | | Sbjct 520045 TCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACGG 520104 Query 110267 TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGT 110326 | || | ||||||| || || || || | ||||| |||| |||||| | Sbjct 520105 GGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGGG 520164 Query 110327 CGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCT 110386 || |||| || | ||| || || ||||||||||| | ||| ||| || | |||||||| Sbjct 520165 CGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCT 520224 Query 110387 GATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCT 110446 | || ||| ||| |||||||| ||||| ||| | ||| | || || || |||| Sbjct 520225 GGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCT 520284 Query 110447 GTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCG-TTAGCGAGACC 110504 | |||| ||| ||||| | ||| | | || | ||| ||| | |||| || || | || Sbjct 520285 GCGACTCGAGGATGGCGTACCAGAGCTTCTG-GGCCTTGAC-GGTGCGCTTGGCACGGCC 520342 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 || ||||||| ||| | | |||||| || | ||||| |||| || || Sbjct 520343 CTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCC 520402 Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || || ||| || | ||| ||||| | || || ||| |||||||||||||| Sbjct 520403 GGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAA 520462 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || || || | ||| | || |||| || || ||| ||| |||| || | || || Sbjct 520463 GAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTG 520522 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| ||| || || | || || | || |||||||||||||| || | || | || Sbjct 520523 GTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGC 520582 Query 110745 GATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801 | || || ||| || |||||| || ||||| || ||| |||||||| Sbjct 520583 AAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGAC 520642 Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861 | |||||| || | || || | | ||| || ||||| ||| ||| | Sbjct 520643 GCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGAACCGGT 520702 Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921 | | || ||| |||||| | | || |||||||| || ||| || ||||| Sbjct 520703 GCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACA 520762 Query 110922 C-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | ||| |||| || | || || ||||| ||||| || |||| ||| | || |||| Sbjct 520763 CGTCT-TGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGC 520821 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 | || || | |||||| | || || || || |||||||| || || | || || || Sbjct 520822 ACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTG--TGT 520879 Query 111041 ACAG-AC-CTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTG 111098 | || || ||| ||||| |||||| || || | ||| | || | ||||| Sbjct 520880 AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTG 520939 Query 111099 AATACCAATGGCAACTCGCATGAACAT 111125 ||||| | ||| || ||||||| ||| Sbjct 520940 GATACCGACGGCGACACGCATGAGCAT 520966 >seq4 Length=1271980 Score = 109 bits (120), Expect = 6e-19 Identities = 317/477 (66%), Gaps = 17/477 (4%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| ||||| || || | || ||| |||| || | || ||||| ||| || Sbjct 926095 CGGTCGAATCGACCGGGACGCATGAGCGCAGCATCGAGCACGTCCGGTCGGTTGGTACCG 926154 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || || | | ||| | ||||||||||||| | ||| | || |||| Sbjct 926155 GCCAGCACGACGACGTGCTCCTCGGTACCGAAACCGTCCATCTGCACGAGCAACTCGTTG 926214 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATA---CCACC--TGCCGAACGCTTCTTAC 11677 | ||| || ||||| |||||| | | | ||||| |||| ||| |||||| Sbjct 926215 AGCGTTGACTCGCGCTCGTCGTTGCCGCCAAAATTGCCACCCTTGCC--ACGGCTCTTAC 926272 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT--C 11735 ||| ||||| ||||| ||||| || | ||| || || || | | || | ||| | Sbjct 926273 CGATGGCGTCGATCTCGTCGATAAAGATGATGCAGGGCGCGT-GCTTCTTGGC-GTTGGC 926330 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || || || | | || ||||| || ||||| || || || | | | Sbjct 926331 GAACATGTCTCGCACTCGGCTAGGACCGACACCGACAAACATTTCGACAAACTCGGAACC 926390 Query 11796 AGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 || || || | |||||| ||| || |||||| ||| |||| || || || |||| Sbjct 926391 CGAG-ACGGACAGGAAGGGCACACCAGCCTCACCGGCGGTGGCCTTGGCAAGCAGCGTCT 926449 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| ||||| || | ||| | ||| | |||||||| ||||||||||| || ||| Sbjct 926450 TACCGGTACCGGGAGGACCGGAGAGGATAGCGCCACGCGGGATCTTGGCGCCGAGCTT-- 926507 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 ||| || |||||||||||||||| |||| |||| | || |||||||| Sbjct 926508 TTCGTACTTTTCGGGCTTCTTGAGGAAGTTGACAAACTCCATGATCTCTTCCTTGGC 926564 >seq8 Length=837966 Score = 84.2 bits (92), Expect = 3e-11 Identities = 167/244 (68%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || || ||||||||||| || |||| || || Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||||| || || || |||||||| Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTC---GA 119670 ||| || || ||| || |||| |||||||| || |||| | || | |||||| || Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 244750 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| || ||||||| ||| || ||| | | ||||| || | || ||| || | Sbjct 244749 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 244690 Query 119731 AAAG 119734 | || Sbjct 244689 AGAG 244686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975801220600