Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq19 212 7e-50 seq8 93.3 5e-14 seq13 84.2 3e-11 >seq19 Length=580969 Score = 212 bits (234), Expect = 7e-50 Identities = 570/864 (66%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || |||||||| || ||||| ||||| |||||| ||| || | ||||||| | | Sbjct 520119 GGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATA 520178 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || ||||||||||| | ||| || || || | ||||| ||||| ||||| | Sbjct 520179 ATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 520238 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || |||||||||||||| ||| |||| | || ||||| ||||| |||| ||| || Sbjct 520239 TTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATG 520298 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 106695 || | ||| | | || | | || | || || ||||| || ||||| |||||||| Sbjct 520299 GCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCG 520357 Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755 ||||||| |||||||| || || ||| | ||| || || || || || Sbjct 520358 CTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGG 520417 Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815 || | || ||||| | || || ||| |||| ||||||||| || || || | ||| Sbjct 520418 GCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCA 520477 Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 || | | ||||| |||| || |||| || | || ||||| || | || Sbjct 520478 GAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 520537 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935 |||||||| | || |||| |||||||||||||| || | || | | || | Sbjct 520538 GAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACC---GGG 520594 Query 106936 ACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989 |||| ||| | || | || ||||| || ||| ||| || ||||| ||||| || Sbjct 520595 ACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGG 520654 Query 106990 AATAATACCAT--CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047 | ||||| | |||| ||| || || || ||| || || | | | Sbjct 520655 CACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATG 520712 Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 107107 ||||||| | || ||||| || || ||| ||||| |||||| | | || Sbjct 520713 CAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGC 520772 Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167 || | ||||| || | ||| ||||| ||||| ||| || |||||||| || | | Sbjct 520773 GTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGC 520832 Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTG 107226 || || || ||||| || ||||||||||| || | ||||| | || ||| ||| Sbjct 520833 TGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGT-AAAGTACTTTTG 520891 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 ||||| || ||| ||||| | | | || ||||| | |||||||| |||| ||| Sbjct 520892 CGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGC 520951 Query 107287 CACACGCATAAACATGTATTGGGG 107310 |||||||| | ||||| ||||| Sbjct 520952 GACACGCATGAGCATGTGCTGGGG 520975 >seq8 Length=837966 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| ||||| || || || || || || || || |||||| || || Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | ||| || |||||||||||||| Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 || || || ||||| || | || ||||||||||| Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA 244770 >seq13 Length=681008 Score = 84.2 bits (92), Expect = 3e-11 Identities = 255/390 (65%), Gaps = 18/390 (5%) Strand=Plus/Plus Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237 |||||||||||||||||| ||||| || | ||| ||| ||||| | ||| | | || Sbjct 284190 GATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATGCTGCC 284249 Query 169238 ATAGCGAA----GTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCT 169293 || || | |||| || || | || | || || || || ||||||||||||| Sbjct 284250 GTATCGCAGACTGTTC----ACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATCT 284305 Query 169294 TCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACAT 169353 ||||| | |||| ||| ||| ||| ||| | || || || ||||| | Sbjct 284306 CCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACGT 284365 Query 169354 TCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGAC 169413 || ||| |||||||| || || || || |||| || | ||| || || || || Sbjct 284366 TCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATAC 284425 Query 169414 CCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAG 169473 | ||||| || || | || || || ||||| || |||| ||||| || || | | Sbjct 284426 CAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCAGTCCTTGG 284485 Query 169474 ATTGC--GCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTTGG- 169530 || | ||| ||| || ||||| || || || | |||||| || || || ||| Sbjct 284486 CTTTCCTGCC--ACCGGCATTGTTGGCATCCTCGAGCTTGGGGATGTTGGTGATCCTGGT 284543 Query 169531 --ACTTGCGAGCACCATCGGTTTTCTTGAG 169558 |||| | ||| ||||| |||||||| Sbjct 284544 TCGCTTGTG---ACCGTCGGTCTTCTTGAG 284570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980600881480