Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq19 212 7e-50
seq8 93.3 5e-14
seq13 84.2 3e-11
>seq19
Length=580969
Score = 212 bits (234), Expect = 7e-50
Identities = 570/864 (66%), Gaps = 17/864 (2%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|| |||||||| || ||||| ||||| |||||| ||| || | ||||||| | |
Sbjct 520119 GGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATA 520178
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || ||||||||||| | ||| || || || | ||||| ||||| ||||| |
Sbjct 520179 ATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 520238
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
|| |||||||||||||| ||| |||| | || ||||| ||||| |||| ||| ||
Sbjct 520239 TTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATG 520298
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 106695
|| | ||| | | || | | || | || || ||||| || ||||| ||||||||
Sbjct 520299 GCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCG 520357
Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755
||||||| |||||||| || || ||| | ||| || || || || ||
Sbjct 520358 CTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGG 520417
Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815
|| | || ||||| | || || ||| |||| ||||||||| || || || | |||
Sbjct 520418 GCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCA 520477
Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875
|| | | ||||| |||| || |||| || | || ||||| || | ||
Sbjct 520478 GAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 520537
Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935
|||||||| | || |||| |||||||||||||| || | || | | || |
Sbjct 520538 GAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACC---GGG 520594
Query 106936 ACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989
|||| ||| | || | || ||||| || ||| ||| || ||||| ||||| ||
Sbjct 520595 ACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGG 520654
Query 106990 AATAATACCAT--CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047
| ||||| | |||| ||| || || || ||| || || | | |
Sbjct 520655 CACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATG 520712
Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 107107
||||||| | || ||||| || || ||| ||||| |||||| | | ||
Sbjct 520713 CAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGC 520772
Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167
|| | ||||| || | ||| ||||| ||||| ||| || |||||||| || | |
Sbjct 520773 GTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGC 520832
Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTG 107226
|| || || ||||| || ||||||||||| || | ||||| | || ||| |||
Sbjct 520833 TGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGT-AAAGTACTTTTG 520891
Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286
||||| || ||| ||||| | | | || ||||| | |||||||| |||| |||
Sbjct 520892 CGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGC 520951
Query 107287 CACACGCATAAACATGTATTGGGG 107310
|||||||| | ||||| |||||
Sbjct 520952 GACACGCATGAGCATGTGCTGGGG 520975
>seq8
Length=837966
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| ||||| || || || || || || || || |||||| || ||
Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||
Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
|| || || ||||| || | || |||||||||||
Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA 244770
>seq13
Length=681008
Score = 84.2 bits (92), Expect = 3e-11
Identities = 255/390 (65%), Gaps = 18/390 (5%)
Strand=Plus/Plus
Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237
|||||||||||||||||| ||||| || | ||| ||| ||||| | ||| | | ||
Sbjct 284190 GATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATGCTGCC 284249
Query 169238 ATAGCGAA----GTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCT 169293
|| || | |||| || || | || | || || || || |||||||||||||
Sbjct 284250 GTATCGCAGACTGTTC----ACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATCT 284305
Query 169294 TCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACAT 169353
||||| | |||| ||| ||| ||| ||| | || || || ||||| |
Sbjct 284306 CCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACGT 284365
Query 169354 TCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGAC 169413
|| ||| |||||||| || || || || |||| || | ||| || || || ||
Sbjct 284366 TCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATAC 284425
Query 169414 CCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAG 169473
| ||||| || || | || || || ||||| || |||| ||||| || || | |
Sbjct 284426 CAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCAGTCCTTGG 284485
Query 169474 ATTGC--GCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTTGG- 169530
|| | ||| ||| || ||||| || || || | |||||| || || || |||
Sbjct 284486 CTTTCCTGCC--ACCGGCATTGTTGGCATCCTCGAGCTTGGGGATGTTGGTGATCCTGGT 284543
Query 169531 --ACTTGCGAGCACCATCGGTTTTCTTGAG 169558
|||| | ||| ||||| ||||||||
Sbjct 284544 TCGCTTGTG---ACCGTCGGTCTTCTTGAG 284570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980600881480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |