Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 428 8e-115 seq8 237 3e-57 >seq19 Length=580969 Score = 428 bits (474), Expect = 8e-115 Identities = 1284/1952 (66%), Gaps = 91/1952 (5%) Strand=Plus/Plus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 |||| |||||| || || ||||| | |||||||| || ||||| |||||||| | | Sbjct 519241 GCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAG 519300 Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGG 212696 ||||| | ||||| | || || ||| | || | || || | | Sbjct 519301 TGCATCGAGGTGAGCTG-----GCCAAA------GGTAGGCGCCGAG----AGGTGAATG 519345 Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756 || || ||||| |||| ||||| | | | ||| ||||||||||| ||||| | Sbjct 519346 TTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCC 519405 Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816 ||||| || |||||| ||||||||| ||| | |||| | || |||| |||||| Sbjct 519406 TTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGGC 519465 Query 212817 ATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTTCCAGA 212874 | |||||| | || || | ||| | | | ||| | ||| |||||||| | Sbjct 519466 ACGTTCTGGATGGAACCGCCGTGAGCGATGA--TGCGGTTCTTCATCGTGTCGTTCCACA 519523 Query 212875 GGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAG 212933 | ||| || || | || | | | || |||||| || | |||||| ||||| | | Sbjct 519524 GACCC-TGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGCG 519582 Query 212934 AGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGA 212993 ||||| | | | ||| | ||| || ||||| ||||||| || ||||||| || || Sbjct 519583 AGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGG 519642 Query 212994 ATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGC 213053 ||||| || ||| |||||||||||||| | ||| || ||| | || |||||| Sbjct 519643 ATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGC 519702 Query 213054 TCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTC 213113 | | |||| | | ||||| ||||||||||| |||||| | | Sbjct 519703 TTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG---------AGGTCCGAGGGGGTG 519753 Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG-GTAAGAGGA 213172 ||| ||||||||| |||||| | | | ||| | |||| || | ||| | Sbjct 519754 ACGC-CCACATGTCGTACTGCA-GCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTC 519811 Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232 ||||| ||| |||| || ||||||||||| || || || || |||| ||||||||| Sbjct 519812 GTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGT 519871 Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT----CATCA 213288 || || || | | |||||| ||||| || ||| | || ||| | ||| | Sbjct 519872 CTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCGTAGCCCATGA 519930 Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 | | | ||| | || || || |||||||| ||||| |||||||| | ||| | || || Sbjct 519931 T-CAT--GAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGT 519987 Query 213349 TAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT- 213406 | || | | || |||||| | |||||| ||||| ||||||||||||||| ||||| Sbjct 519988 TGGATCGACGGGC-CTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTC 520046 Query 213407 --GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTA------G 213458 || | ||||| |||| ||| | | ||| ||| ||||| |||| | Sbjct 520047 TTGCAGATGGCC---TTGGCGACCTCGTGCAGA----CGT--TTGAAGTCGTACGTCTTG 520097 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | || | | || || |||||||| ||||| |||||| || |||||||| Sbjct 520098 GCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCG 520157 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | | | | ||||||| || ||||||||||||| |||| ||| ||||||||| ||| Sbjct 520158 TCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGG 520217 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||| ||| || | |||||||||||| ||| ||||| |||||| Sbjct 520218 TTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTC 520277 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || ||| ||| | || || | |||||| | | ||||||||| ||| || || Sbjct 520278 TCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCA 520337 Query 213699 GCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCC 213756 ||| | | |||||||| | |||||||| | || |||| ||| || | | Sbjct 520338 ----CGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTC 520393 Query 213757 TGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACT 213815 | | || || || || ||| |||||||| |||||| ||| || ||| ||| Sbjct 520394 AG-CGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTC-GACC 520451 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 |||| |||||| || || || ||||| || ||| ||| || || | || | | ||| Sbjct 520452 CTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCC 520511 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| ||||| || || || || ||||||| ||||| |||||| ||||| Sbjct 520512 TCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCA 520571 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACC 213992 | ||| ||||||||||| || | || | ||||| |||||||| || | ||| Sbjct 520572 ACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTG 520631 Query 213993 ATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG--GACTGTCCGTTGGTTCCCGCTA 214050 ||||||||| ||| || | ||| || | |||||| ||| |||||||| || || | Sbjct 520632 TTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGAC--ACCGTTGGTACCGGCAA 520689 Query 214051 TATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGG 214110 | || || |||| | | | | | | ||| ||| || || ||||||||| ||||| Sbjct 520690 TGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGG 520749 Query 214111 AGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGT 214170 |||||||||| || | | | || || |||||| | || ||| || | | | Sbjct 520750 AGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGG 520809 Query 214171 TCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGC 214230 | | | |||||| ||||||||| || | | || | |||||| || |||||| Sbjct 520810 TGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGG 520869 Query 214231 TGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGT 214290 ||| || | | |||| | || | ||| |||||||||| | | | ||||| Sbjct 520870 AGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGT 520929 Query 214291 CGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTC 214350 | || |||||| | ||| | ||| |||||||||||||| | ||| || | | Sbjct 520930 CCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGCTC--TGCGAC 520987 Query 214351 CTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 ||| ||| || ||| |||||||||||||| || |||||||| || ||| || Sbjct 520988 CTT----GCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGAAGAAGT 521043 Query 214405 AGTAG-GTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGCTCTTGG 214463 |||| | | | ||| | ||| |||| ||| | ||| |||| ||| |||||| | Sbjct 521044 TGTAGTGGAAG-TCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCTCCATG 521102 Query 214464 CTCAGCTTGAAAATCTCGTCCGAGATCAAGGG 214495 | |||| | | |||||||||||| ||| Sbjct 521103 ACGACCTTGTAGGTGGCGTCCGAGATCATGGG 521134 >seq8 Length=837966 Score = 237 bits (262), Expect = 3e-57 Identities = 389/559 (70%), Gaps = 9/559 (2%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||||||||| |||||| |||||||| || ||||||| ||||||||| Sbjct 244938 AGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGA 244879 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||| ||||||| || | || ||||||||||| || | ||||| ||||| | Sbjct 244878 AGGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGG 244819 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||||||||| || || || || || ||| ||| | ||| |||||| ||| || Sbjct 244818 AGAAGAAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCT 244759 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||| ||||||||||| || |||| ||||| | || || ||||| | Sbjct 244758 TGTCGCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGA 244699 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 ||| ||||| || || || | | || || ||||| |||| ||| Sbjct 244698 CGGCGTCAAAGAGGAGCTCGCGCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGC- 244640 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | ||| |||| ||||| | ||||| || ||||||||| ||||||||| | | Sbjct 244639 --GAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAG 244582 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 |||| | ||||| || | | ||| | ||| | || ||||| ||||| || || | Sbjct 244581 CCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGT 244522 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | ||||| || |||||||| ||||| || | || ||||| ||||||| | |||| Sbjct 244521 CGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCT 244462 Query 48600 CATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 || |||| | || | || ||| ||||| | ||||| | ||||||||||| | Sbjct 244461 TGTTGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAG 244402 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || ||||||||||| Sbjct 244401 CCTCGGCCTTTTTGTACAT 244383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532485607680