Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq19 342 1e-88 seq8 203 6e-47 >seq19 Length=580969 Score = 342 bits (378), Expect = 1e-88 Identities = 876/1320 (66%), Gaps = 33/1320 (3%) Strand=Plus/Plus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429 |||| | |||||||| |||| | | | ||| | |||| || || || || |||| Sbjct 519802 CGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGT 519861 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 ||||||||||||| ||||| | |||||| | ||||||||||| | || ||| Sbjct 519862 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCG 519920 Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 || | || ||| ||| ||||||| || ||||| || |||||||||||||| | ||| Sbjct 519921 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 519980 Query 221549 CTCCTGTTGGAAG--CGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | | ||||||| ||| | || || | ||||| || |||||| |||||| | |||| Sbjct 519981 CGCATGTTGGATCGACGGGC-CTCCTCG-ACGGGGTAGTAGTTGATGTCGATGATCTTGT 520038 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 | |||||| |||| | || | |||||| ||| | ||||| | || Sbjct 520039 TAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGAC------GTTTGAAGTCGTAC- 520091 Query 221667 CGCCGCCGTCGTGGAG--GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724 ||| ||| | ||| || | || | | ||||| | ||||| ||| || Sbjct 520092 -------GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCA 520144 Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784 || ||||||||||| | | | |||| || ||||| || || | |||| |||||| Sbjct 520145 GACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTT 520204 Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844 |||||| || |||| || || || |||||| || || || ||||||||||| || || Sbjct 520205 GATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAA 520264 Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTC-A 221903 ||| ||| ||||| ||| | | | || || || |||||| | ||||| || | Sbjct 520265 GGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT-TCTGGGCCTTGA 520323 Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963 | || | |||| | ||||||| || | | || ||||| ||||||| | Sbjct 520324 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCG---TAGAGGCGCTCAAACTCGT 520380 Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023 | ||||| || | ||||| || ||| | ||| ||||| || ||||| || Sbjct 520381 CGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGT 520440 Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083 | | | |||||||| ||||||||| || || | ||| || || | ||||| |||| || Sbjct 520441 TCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGG 520500 Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143 ||| ||||||| ||||| ||| || | || || | |||||||| | ||| | || Sbjct 520501 CACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGT 520560 Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203 |||| ||||| | || | ||| | || ||||| ||||||||||||||||| || || Sbjct 520561 GCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 520620 Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 | | |||||||| ||| || | || || | |||||| |||||||| Sbjct 520621 AGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGG 520680 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACCACCG 222322 | || |||||| | |||| | | | | | | ||| | | ||||||||||||| Sbjct 520681 TACCGGCAATGTAGGAACCGGTGCCGCGGATG-CAGTGGATGTTGAGGCCGATACCACCG 520739 Query 222323 GCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCC 222382 ||| || ||||||||||| || ||||||| ||||| |||||| || || ||||| Sbjct 520740 GCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCG 520799 Query 222383 TCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAAC 222442 ||||| | | | | || || || ||||| | ||||| | | || || ||||| || Sbjct 520800 TCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAG 520859 Query 222443 AGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACT 222502 || ||||| ||||||||||||||| ||||| || | ||| ||||| | | | Sbjct 520860 AGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCG 520919 Query 222503 CTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTC 222562 || |||||| | ||||| || | |||| | |||| ||||| |||||| | | Sbjct 520920 CTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGC 520979 Query 222563 TCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620 || | |||| | | | || ||| ||||| || || || |||||||| || | Sbjct 520980 TCTGC--GACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGA 521037 Query 222621 AGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680 || ||||| || ||||| | ||| | | ||| | ||| |||| |||||||| Sbjct 521038 AGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCT 521097 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||||||||| ||||| || || | |||||| | | | ||| | ||| || ||| | || Sbjct 519558 GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGG 519617 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||| ||| ||||||||| || ||||||||||||||| || | Sbjct 519618 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 519677 Query 221236 CAGCAGACTGTTGCGCAGTCCG 221257 ||| || ||||||||| ||| Sbjct 519678 CAGAAGCGAGTTGCGCAGACCG 519699 >seq8 Length=837966 Score = 203 bits (224), Expect = 6e-47 Identities = 390/573 (68%), Gaps = 13/573 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||| ||||| | || |||||||||||||||||| || || Sbjct 244374 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 244433 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| || |||| | | | |||| | || ||| || Sbjct 244434 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAACGCCACTTTATCT 244491 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | |||| | || ||||| || || || || ||||| || |||||||| || |||| Sbjct 244492 CGCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGC 244551 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | || ||||| || ||||| || ||||||||||||||||| | Sbjct 244552 GTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 244611 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||| ||| || | ||| || || || |||||| || Sbjct 244612 TGGAGAACATCCACTCGGAGACCTACTC---GCTCCTCATCGACACCTACATTCGCGAGC 244668 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || || | || | || |||| ||| ||||| ||| ||| | ||||| ||| | Sbjct 244669 CCGAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAG 244728 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||||| | | || |||| || || | |||||| || || | Sbjct 244729 CCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 244788 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || || || |||||||| ||| ||| || || || ||||||||||||||| Sbjct 244789 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 244848 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| || ||| ||||||||||||||| | ||||| | Sbjct 244849 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 244908 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||| |||| || ||||||||||| |||| || Sbjct 244909 GTCTGCACACCGACTTTGCCTGCCTCCTCTTCA 244941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844486514880