Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq19 342 1e-88
seq8 203 6e-47
>seq19
Length=580969
Score = 342 bits (378), Expect = 1e-88
Identities = 876/1320 (66%), Gaps = 33/1320 (3%)
Strand=Plus/Plus
Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429
|||| | |||||||| |||| | | | ||| | |||| || || || || ||||
Sbjct 519802 CGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGT 519861
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
||||||||||||| ||||| | |||||| | ||||||||||| | || |||
Sbjct 519862 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCG 519920
Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548
|| | || ||| ||| ||||||| || ||||| || |||||||||||||| | |||
Sbjct 519921 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 519980
Query 221549 CTCCTGTTGGAAG--CGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
| | ||||||| ||| | || || | ||||| || |||||| |||||| | ||||
Sbjct 519981 CGCATGTTGGATCGACGGGC-CTCCTCG-ACGGGGTAGTAGTTGATGTCGATGATCTTGT 520038
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
| |||||| |||| | || | |||||| ||| | ||||| | ||
Sbjct 520039 TAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGAC------GTTTGAAGTCGTAC- 520091
Query 221667 CGCCGCCGTCGTGGAG--GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724
||| ||| | ||| || | || | | ||||| | ||||| ||| ||
Sbjct 520092 -------GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCA 520144
Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
|| ||||||||||| | | | |||| || ||||| || || | |||| ||||||
Sbjct 520145 GACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTT 520204
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| || |||| || || || |||||| || || || ||||||||||| || ||
Sbjct 520205 GATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAA 520264
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTC-A 221903
||| ||| ||||| ||| | | | || || || |||||| | ||||| || |
Sbjct 520265 GGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT-TCTGGGCCTTGA 520323
Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963
| || | |||| | ||||||| || | | || ||||| ||||||| |
Sbjct 520324 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCG---TAGAGGCGCTCAAACTCGT 520380
Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023
| ||||| || | ||||| || ||| | ||| ||||| || ||||| ||
Sbjct 520381 CGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGT 520440
Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083
| | | |||||||| ||||||||| || || | ||| || || | ||||| |||| ||
Sbjct 520441 TCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGG 520500
Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143
||| ||||||| ||||| ||| || | || || | |||||||| | ||| | ||
Sbjct 520501 CACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGT 520560
Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203
|||| ||||| | || | ||| | || ||||| ||||||||||||||||| || ||
Sbjct 520561 GCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 520620
Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | |||||||| ||| || | || || | |||||| ||||||||
Sbjct 520621 AGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGG 520680
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACCACCG 222322
| || |||||| | |||| | | | | | | ||| | | |||||||||||||
Sbjct 520681 TACCGGCAATGTAGGAACCGGTGCCGCGGATG-CAGTGGATGTTGAGGCCGATACCACCG 520739
Query 222323 GCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCC 222382
||| || ||||||||||| || ||||||| ||||| |||||| || || |||||
Sbjct 520740 GCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCG 520799
Query 222383 TCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAAC 222442
||||| | | | | || || || ||||| | ||||| | | || || ||||| ||
Sbjct 520800 TCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAG 520859
Query 222443 AGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACT 222502
|| ||||| ||||||||||||||| ||||| || | ||| ||||| | | |
Sbjct 520860 AGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCG 520919
Query 222503 CTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTC 222562
|| |||||| | ||||| || | |||| | |||| ||||| |||||| | |
Sbjct 520920 CTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGC 520979
Query 222563 TCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
|| | |||| | | | || ||| ||||| || || || |||||||| || |
Sbjct 520980 TCTGC--GACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGA 521037
Query 222621 AGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680
|| ||||| || ||||| | ||| | | ||| | ||| |||| ||||||||
Sbjct 521038 AGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCT 521097
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||||||||| ||||| || || | |||||| | | | ||| | ||| || ||| | ||
Sbjct 519558 GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGG 519617
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||| ||| ||||||||| || ||||||||||||||| || |
Sbjct 519618 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 519677
Query 221236 CAGCAGACTGTTGCGCAGTCCG 221257
||| || ||||||||| |||
Sbjct 519678 CAGAAGCGAGTTGCGCAGACCG 519699
>seq8
Length=837966
Score = 203 bits (224), Expect = 6e-47
Identities = 390/573 (68%), Gaps = 13/573 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||| ||||| | || |||||||||||||||||| || ||
Sbjct 244374 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 244433
Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
||||||| | ||| |||| || |||| | | | |||| | || ||| ||
Sbjct 244434 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAACGCCACTTTATCT 244491
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
| |||| | || ||||| || || || || ||||| || |||||||| || ||||
Sbjct 244492 CGCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGC 244551
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711
| |||| | || ||||| || ||||| || ||||||||||||||||| |
Sbjct 244552 GTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 244611
Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768
| || || | ||||| ||| || | ||| || || || |||||| ||
Sbjct 244612 TGGAGAACATCCACTCGGAGACCTACTC---GCTCCTCATCGACACCTACATTCGCGAGC 244668
Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
|| || | || | || |||| ||| ||||| ||| ||| | ||||| ||| |
Sbjct 244669 CCGAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAG 244728
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || ||||||| | | || |||| || || | |||||| || || |
Sbjct 244729 CCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 244788
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
||||||| || || || |||||||| ||| ||| || || || |||||||||||||||
Sbjct 244789 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 244848
Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008
|| || || ||||||||| || ||| ||||||||||||||| | ||||| |
Sbjct 244849 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 244908
Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041
|||| |||| || ||||||||||| |||| ||
Sbjct 244909 GTCTGCACACCGACTTTGCCTGCCTCCTCTTCA 244941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844486514880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |