Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq17 86.0 4e-11
>seq17
Length=605135
Score = 86.0 bits (94), Expect = 4e-11
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| || || |||||||| ||||| ||||| || || ||||| || || || |||||||||
Sbjct 222017 TCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTG 222076
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
||||| ||||| ||||| || || || |||| | || ||||| ||
Sbjct 222077 TCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATG 222136
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||||||||||||||| || || ||
Sbjct 222137 GTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 222168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178041838996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |