Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq19 170 2e-37
seq8 93.3 5e-14
seq13 84.2 3e-11
>seq19
Length=580969
Score = 170 bits (188), Expect = 2e-37
Identities = 563/865 (65%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| ||||| |||| |||||||| | ||||| || | |
Sbjct 520975 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 520916
Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || ||||| ||| ||| || | ||||| | || ||||||||
Sbjct 520915 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 520857
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || ||||| || || ||| | || |||||||| || ||| ||||| ||
Sbjct 520856 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 520797
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | |||||| ||||| ||| || ||
Sbjct 520796 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 520737
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || | ||||||| | | | || || ||| || || ||
Sbjct 520736 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 520677
Query 75511 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 520676 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 520619
Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| | || | || ||||| | || || | || | ||| | || ||||||
Sbjct 520618 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 520562
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| | || || | |||||||| || | || ||||| || | || |||| ||
Sbjct 520561 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 520502
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
|||| ||||| | | || ||| | || || || ||||||||| |||| ||| ||
Sbjct 520501 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 520442
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||||| || | || || || || || || ||| | ||| ||
Sbjct 520441 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 520382
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGT 75861
|| |||||||| ||||||| || || | ||||| | ||||| ||| || ||
Sbjct 520381 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAA-GCGCACCGT 520323
Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
| || | | || | | ||| | || || ||| | || ||||| ||||| || | || |
Sbjct 520322 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 520264
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
|| || ||||||||||| |||| ||||| ||||| ||||| | || || ||||
Sbjct 520263 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 520204
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
|| |||| || | ||||| || ||| | ||||||| | || ||| |||||| |
Sbjct 520203 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 520144
Query 76041 GCAATTTGGCATCAATCGCCCTTCC 76065
|||| ||||| || |||||||| ||
Sbjct 520143 GCAACTTGGCCTCGATCGCCCTCCC 520119
>seq8
Length=837966
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||||||||| || | || ||||| || || || |||||||||||||| || |||
Sbjct 244770 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 244829
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| | || | ||| | |||||||| ||||||||||| || || |||||| || ||
Sbjct 244830 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 244889
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|| || || || || || ||||| ||| || ||||||
Sbjct 244890 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCC 244928
>seq13
Length=681008
Score = 84.2 bits (92), Expect = 3e-11
Identities = 255/390 (65%), Gaps = 18/390 (5%)
Strand=Plus/Minus
Query 13514 CTCAAGAAGACCGATGGTGCTCGCAAGT---CCAAAATTACCGGTATTCCCAAGTTGGAT 13570
|||||||||||||| ||| | |||| ||| || ||| || |||||| | ||
Sbjct 284570 CTCAAGAAGACCGACGGT---CACAAGCGAACCAGGATCACCAACATCCCCAAGCTCGAG 284514
Query 13571 GACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG--TGTACTCTCATTGTCACAGAGG 13628
|| || ||||| || ||| |||| | || | || || ||||| |||| || |
Sbjct 284513 GATGCCAACAATGCCGGT--GGCAGGAAAGCCAAGGACTGCACGCTCATCCTCACCGAAG 284456
Query 13629 GTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACG 13688
|||| ||||| || | ||||| || || ||| || | || || | || ||||||
Sbjct 284455 GTGACTCGGCCAAGTCGCTCGCCGTCGCTGGTATCGTCGAGGTCGGAAGAGACAACTACG 284396
Query 13689 GTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCACAGCTCA 13748
|||||||||| || || ||||| ||| || || || || || | ||| |||
Sbjct 284395 GTGTGTTCCCGCTCCGTGGTAAGCTCTTGAACGTCCGTGAAGCCTCTCACGATCAGATCA 284336
Query 13749 CATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGACT 13808
||| ||| |||| | ||||| ||||| | ||||| || || || || | |
Sbjct 284335 TGAAGAACGCCGAGATCAAGGCCATCAAGGAGATCTTGGGTCTGCAGCACGGCAAGCAGT 284276
Query 13809 ACCAAGATGTTTCTGAA----CTTCGCTATGGTCGTCTTATGATTATGACAGATGCCGAT 13864
| | || | |||| || || || || | | ||| | ||||| ||| |||
Sbjct 284275 ATCTTGACG----TGAACAGTCTGCGATACGGCAGCATCATGGTCATGACCGATCAGGAT 284220
Query 13865 AATGATGGTTCTCACATCAAGGGTCTCATC 13894
| || ||||| ||||||||||||||||||
Sbjct 284219 CACGACGGTTCGCACATCAAGGGTCTCATC 284190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569398657760
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