Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq14 100 8e-16 >seq14 Length=652314 Score = 100 bits (110), Expect = 8e-16 Identities = 240/358 (67%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 || || ||||| || ||||||| | |||| |||| ||||| | ||||| ||||| Sbjct 38259 TCGATACCGTCTTCACCGTAGGCAAACTGGATGACGTTGTTGGTCGAATTTCGCACGGTG 38318 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 || || | | ||||| ||| || | | |||| ||||||||||| || ||||| Sbjct 38319 CCGTCGTAGCACACCATAACGTCCTCGAGAGCTTTGACCAAACGACGCTGGATGTAACCG 38378 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 || | || || || || || || || ||||| | ||||| |||| || |||||| Sbjct 38379 GTCTCGGCGGTCTTGACGGCCGTGTCGATAAGACCTTCTCGACCGGCCATGGCGTGGAAG 38438 Query 302671 AATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 || | ||||| | ||| || || | | | ||| |||| || || ||||| ||| Sbjct 38439 AAGAACTCTT-GAGCCGTGAGACCTCGCAGGTACGAGTTCTCGACAAAGCCACGACTCTC 38497 Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 ||| | |||| ||| |||||||| ||||| | | || | || | || || Sbjct 38498 GGGGGTGAAGTCGTCCTTAGTAAAGTGAGGCAGACTGCGGTGGCGGAAACCAAAGGGAAT 38557 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCC----CAGGCACGAAATCATCTGCGAAATATT 302843 |||||| || || ||| ||||||||| ||||| ||| ||||||||| || || Sbjct 38558 ACGCTTGCCCTCGACGGACTGCTGTCCGACACAGGC-CGA---CATCTGCGAGATGTT 38611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817090843099