Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq19 183 3e-41
seq17 132 4e-26
seq11 120 3e-22
>seq19
Length=580969
Score = 183 bits (202), Expect = 3e-41
Identities = 972/1524 (64%), Gaps = 49/1524 (3%)
Strand=Plus/Plus
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
||||| || |||||||| | || ||||| ||| |||||| ||| ||||||| ||
Sbjct 519565 ACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAG 519624
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
| |||||| || || |||||| || | ||||| |||||| || | || |||
Sbjct 519625 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGC 519684
Query 138628 GAATTCCGTAAACCGTGAAGCTTGAT--TCGTT-CCTTGAGCGACGACCAGTCCCACAAA 138684
|| || || | |||||| |||| || | |||||||| | ||||||||| |
Sbjct 519685 GAGTTGCGCAGACCGTG---CTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGAGG 519741
Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744
|| | ||| | |||||| |||||||| | | ||| ||||| |||
Sbjct 519742 TC-CGAGGGGGTGACGCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCG 519800
Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGAGCGCACC 138803
|||| | ||||| || || || |||| |||| | |||| ||||| || |
Sbjct 519801 GCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGC 519859
Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863
| ||| || || ||| || ||| ||||| || ||||||| ||| | ||
Sbjct 519860 GTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GG 519918
Query 138864 CAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922
| | || | ||| |||| |||||||| || || || || || | |||| || || |
Sbjct 519919 CGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGT 519978
Query 138923 GGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGT 138982
|||||| || || || | |||| || || ||||| | |||||||| ||||
Sbjct 519979 GGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGT 520038
Query 138983 TTAAATT-TCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041
| | || | ||| || |||| | | | | |||| || ||||| ||
Sbjct 520039 TAAGGTTCTTGCA-GATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTC--- 520094
Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101
| | ||||| ||||| || || || |||||||| | |||||| ||
Sbjct 520095 ------TTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACA 520148
Query 139102 GCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161
||||| ||||||||| ||||||| |||| ||| |||| ||||| || ||||||||
Sbjct 520149 GCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATG 520208
Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221
|| || | || | || ||||| || |||||| ||||| ||||| || || | ||
Sbjct 520209 GTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGG 520268
Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAG--CTTGTATT 139278
|||| || || || | ||| | ||| | | || || || | ||||
Sbjct 520269 TTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGT--ACCAGAGCTTCTGGGCCTTGACGG 520326
Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACC 139337
|| ||| | | | | ||| |||||| |||||||| || || |||| | ||
Sbjct 520327 TG-CGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGT-CGCC 520384
Query 139338 GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGC 139397
|||| ||||| || || | |||| || || |||||||||||||| ||||||||
Sbjct 520385 GTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTG 520444
Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457
|| ||| | | ||||||| ||||| || | ||| | ||| | | | || || ||
Sbjct 520445 CTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACG 520504
Query 139458 CTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGC 139515
| || ||| || ||| || | | || ||||| ||||| ||||| | ||||
Sbjct 520505 CACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGC 520562
Query 139516 CATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGT 139572
||||| || | || ||||| | || || || ||| ||||| || |||||||
Sbjct 520563 CATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAG 520622
Query 139573 CGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT-CCGTTGGT 139631
|| | | || ||||| ||||| | ||| ||| | | |||| | |||| ||||||||
Sbjct 520623 CGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTT-GCTGACACCGTTGGT 520681
Query 139632 ----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGC 139687
|| | | | || || | ||| | |||| | || | |||| |||||| || |
Sbjct 520682 ACCGGCAATGTA-GGAACCGGTGC---CGCGGATGCAGTGGATGTTGAGGCCGATACCAC 520737
Query 139688 CGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTG 139746
|| | ||||| || | | || || | | || ||||| || || || |
Sbjct 520738 CGGCGGTCTTGGAGATCATGGCACACGTCTTG-AGCGTGTCGTAGATGCCATCGATCGAG 520796
Query 139747 TCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCA 139806
||||||| ||| ||||| || ||||| ||||| || || || | || || ||
Sbjct 520797 TCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTG 520856
Query 139807 AACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATG 139866
|| || || || ||||| || || | || |||||| | | ||| || || |||
Sbjct 520857 AAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATG 520916
Query 139867 GCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATC 139926
|||||| | || ||| |||||||||||||| | ||| ||||| ||||| || |||
Sbjct 520917 GCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGA 520976
Query 139927 CGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCA 139986
|| || || ||| ||| | ||| || || | ||| || |||||| ||||
Sbjct 520977 CGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCG 521036
Query 139987 AAGTACCTATAGTTGAAATCGAGC 140010
||| | | |||| ||| ||| ||
Sbjct 521037 AAGAAGTTGTAGTGGAAGTCGCGC 521060
>seq17
Length=605135
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || ||||| || || || || ||||| || || || |
Sbjct 222172 GATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 222113
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| ||||| || || ||||||||
Sbjct 222112 TGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 222053
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | |||||||| || || ||||| ||||| | | | || || || ||
Sbjct 222052 GCAGCGACTTATCTTTGCAGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAA 221993
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| ||||| || |||||||| ||||| | || |||||
Sbjct 221992 CATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGCGTCTCCGTGGAGG 221945
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| |||| || || || ||||| || || || ||||| || || | |
Sbjct 300242 GATGCAGATCTTCGTTAAGACCCTCACGGGTAAGACCATCACTCTCGAGGTCGAGTCTTC 300183
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 300182 GGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 300123
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879
|| || ||||||| || || || ||||| ||||| || | ||| | || || ||
Sbjct 300122 GCAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGA--CG-GCCACACCCTTTCGGACTA 300066
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||| ||||| || ||||||||| | || |||| || ||
Sbjct 300065 CAACATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 300015
>seq11
Length=790822
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || |||||||| || || || ||||| || || | ||
Sbjct 631510 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 631569
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| || || || || || |||||
Sbjct 631570 GACACTATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAG 631629
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||||||||| || ||||| ||||| | | | | || ||||| |||
Sbjct 631630 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTACAAC 631689
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| ||||| || ||| ||||
Sbjct 631690 ATCCAGAAGGAGTCGACCCTCCACCTGGT 631718
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || ||||| || || || || ||||||||||| || || || |
Sbjct 631966 ATGCAAATCTTTGTCAAGACGCTCACGGGCAAGACCATTACGCTCGATGTCGAGTCCTCG 632025
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || |||||||| ||
Sbjct 632026 GATACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 632085
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || |||||||||||| | | | || || || |||
Sbjct 632086 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACTCTTTCGGACTACAAC 632145
Query 24884 ATTCAAAAGGA 24894
||||| |||||
Sbjct 632146 ATTCAGAAGGA 632156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897448159560
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