Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq20 129 5e-25 >seq20 Length=573042 Score = 129 bits (142), Expect = 5e-25 Identities = 212/306 (69%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || ||||| ||||| | || || || | ||||||||| ||||||||| | Sbjct 380042 TGAGATCGGTCTCGGGGTTCTTGCAGTCGCCGCAGAGGACAAACTTGTCGATGAAACCGT 379983 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || || || | | | | |||||| | ||||||||| ||| | || ||||| | Sbjct 379982 CGAGGAGCTCTCGGAGACGGTCAGCGTCGTGAGCGCCGTTGACAATGTAACGATCGTTCT 379923 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | |||| | || || ||||| |||||||| || ||| |||| || ||||| | | Sbjct 379922 TCTTGTCGAACGAGGTCTGAGCGCCGAGCTCGCAGCCAAAGAACTTGGTGGGGTAGGTCG 379863 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | || | || || |||| ||||||| |||||| |||||||| |||| Sbjct 379862 GGGGACGGCTGAGGGAGCGAGCAATGTCGGACATGTTGGGGATGACGGTCTTGATACCGT 379803 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCG 34612 ||||||| || |||| |||| || | | ||||| ||| ||||||||| ||| Sbjct 379802 TGCCCTTGCCCTCGATTTTGGTCTGGAGGAGAGGCATGCGGTATCGGTAGAACTTGTCGT 379743 Query 34613 CCACAT 34618 | |||| Sbjct 379742 CGACAT 379737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841464149311