Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq8 221 2e-51
seq19 190 3e-42
seq3 141 1e-27
seq14 140 5e-27
seq2 116 6e-20
seq17 89.7 8e-12
>seq8
Length=837966
Score = 221 bits (244), Expect = 2e-51
Identities = 248/330 (75%), Gaps = 9/330 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
|||||||||||| ||| | |||||| ||| ||| ||||||||||| ||||||||
Sbjct 244910 ACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTT 244851
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| ||| ||| ||||| |||||||| || |||||||||||
Sbjct 244850 CTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATGCCTTCAACGGCGGCAAA 244791
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| ||||||| |||||||| |||||| | || || | | ||||||| || ||||||
Sbjct 244790 GGCGACGAGACGCTCGGCGAAAGTGGC---GCGCTTGTCGCTGATCCATCGCAGCGCCCA 244734
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTT 794576
|| || || | | | || ||| | || |||| |||| ||||||| | || ||
Sbjct 244733 GTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGCTCGCGCTG 244674
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|||| || || | |||||||||||||||||||||||||||||| |||||||||||
Sbjct 244673 CTCG---GGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTT 244617
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || ||||||||| || || |||||
Sbjct 244616 CTCCATCATGATCTGGAAACCGTAGAAGCA 244587
Score = 131 bits (144), Expect = 3e-24
Identities = 160/217 (74%), Gaps = 11/217 (5%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| |||| ||||| |||| || || | |||||||| ||||| |||
Sbjct 244582 GCCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCG 244523
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| |||||||| ||||||||||||||| ||||||||| || |||| |||| |||||
Sbjct 244522 TCGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGC 244463
Query 796270 ---GAGACCCAGTGGACCGTG----TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAA 796322
| |||||| |||| || | ||||||| ||| ||||||||||| ||
Sbjct 244462 TTGTTGTCCCAGT----CGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAA 244407
Query 796323 GGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359
||| |||||||||||||||||||| | ||| ||| ||
Sbjct 244406 GGAAGCCTCGGCCTTTTTGTACATTTGCCAGATCTGT 244370
>seq19
Length=580969
Score = 190 bits (210), Expect = 3e-42
Identities = 345/505 (68%), Gaps = 15/505 (3%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| ||||| || |||| ||| |||||||||||||||||||| | ||||||
Sbjct 520610 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCT 520669
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||||| || | | |||| | ||| | | |||
Sbjct 520670 GACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCC 520729
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||||||||| | || ||| | || ||||| ||||||||||| ||
Sbjct 520730 GATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATC 520789
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|||||||||| |||||||| | || |||||||||||| || ||| ||| || ||
Sbjct 520790 GATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACC 520849
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| |||||||| ||||| | || || | ||| ||| |||||| | ||||||
Sbjct 520850 TGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGT 520909
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | ||| | | | ||| ||| ||| | ||| |||| ||||||
Sbjct 520910 CTCAATGGCGCTCTCGA---TGTCCTGGCCGTGG--------ATA----CCGACGGCGAC 520954
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||| ||||| |||||| ||||| |||| | || | | ||||||||
Sbjct 520955 ACGCATGAGCATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGA 521014
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | ||| ||| | |||| | ||||||||||| | ||||||
Sbjct 521015 GCGCTCGAGCGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGC 521074
Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044
| |||||| ||||||||| ||
Sbjct 521075 CGAGTCGAGCTGGTCCTTGTGCTCC 521099
Score = 141 bits (156), Expect = 1e-27
Identities = 285/429 (66%), Gaps = 0/429 (0%)
Strand=Plus/Plus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643
||||||||||| ||||| || | ||||||| ||||||| ||||||||| | ||||
Sbjct 520181 CTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 520240
Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703
|||| ||||||| || ||| |||| || |||||| |||||| | || ||||||
Sbjct 520241 AGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGC 520300
Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763
|||| | | | || || | | | | || |||||||
Sbjct 520301 GTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTC 520360
Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823
||||| ||||| || |||||| ||| || |||||||| |||| |||||
Sbjct 520361 GTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCA 520420
Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883
| |||||||||||||||| | | || | ||| || || ||| | ||| ||
Sbjct 520421 CATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAG 520480
Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943
|||| ||||| || || || || ||||||||||||||||||||| ||||||||
Sbjct 520481 TGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAG 520540
Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003
| || | || ||| | |||||| ||||| | ||| ||||||||| || |||||
Sbjct 520541 GAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTT 520600
Query 2072004 GCCGCCGCC 2072012
| ||| ||
Sbjct 520601 GTTGCCACC 520609
Score = 87.8 bits (96), Expect = 3e-11
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCTC 2070110
|| || |||||||| ||||| ||||| ||| |||||| ||||| || ||| |||
Sbjct 519855 GCGGCGTGGTAGATGGTCTCGAAGATA-TGCACGTTGAGACGACGAGCCTCGGGAGACTC 519913
Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170
| | | |||| || || |||||||| || ||||| || |||| || || ||
Sbjct 519914 AAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGG 519973
Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|||||||||| ||| || | |||||||| || ||||||| ||||||||||||
Sbjct 519974 ACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGAT 520030
>seq3
Length=1566833
Score = 141 bits (156), Expect = 1e-27
Identities = 183/253 (72%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | ||
Sbjct 200558 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAGAGCTCACCGGGGAGGA 200499
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
| ||||| ||||||||||||||||| || | ||| || |||||| | |
Sbjct 200498 TGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGATGGTCGACTTCTTGTTGTAGGAAG 200439
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
| || | |||||| ||| ||||||| |||| ||||| | ||| |||||||| | |
Sbjct 200438 CGAGCTTGGAGGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTGAGAA 200379
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712
| | ||| | ||||| ||||| || ||||||||| |||||||||||||| ||| |
Sbjct 200378 TGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGGACCTGCTTGAGCACACGGTAGA 200319
Query 1485713 CAAAGGACGAGTA 1485725
||| ||||||
Sbjct 200318 TGTAGGTCGAGTA 200306
>seq14
Length=652314
Score = 140 bits (154), Expect = 5e-27
Identities = 222/314 (71%), Gaps = 6/314 (2%)
Strand=Plus/Minus
Query 429508 CGCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGA 429567
|||| ||| ||| |||| |||||||||||||| |||||| ||| | | |
Sbjct 39609 CGCTGCAGCCCGGCTGGATTGTCGAGCGCCACCTCAAGGATGGCGACTATGTGCTATTCA 39550
Query 429568 ACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCG 429627
|||| || || ||||| |||| | ||| ||| | |||| | | || |||| |
Sbjct 39549 ACCGTCAACCTTCGCTGCACAAGATGTCCATGATGTCGCACAGGATCAAGCTCATGGACT 39490
Query 429628 GTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCG 429687
||||||||| |||||||| || ||| | ||||||||||||| || ||||| |
Sbjct 39489 ACTCCACCTTCCGTCTCAACCTCAGTGTCACGCCCCCCTACAACGCCGATTTCGACGGTG 39430
Query 429688 ACGAGATGAACCTGCACGTGCCCCAG-TCGGAGATGGCACGCGCCGAAGTCGCCCACA-- 429744
||||||||||| |||||||||||||| || ||| | | |||||||| || | || |
Sbjct 39429 ACGAGATGAACTTGCACGTGCCCCAGAGCGAAGA-GACGCGCGCCGAGCTCTCGCAGATT 39371
Query 429745 CCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCG 429804
||||| ||| | | || || ||||||||||||||||||||| |||| || |||
Sbjct 39370 GCATGG--GTGCCGCGTCAGATTGTCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATCG 39313
Query 429805 TGATGGACGCCCTC 429818
|| |||| | |||
Sbjct 39312 TGCAGGACACGCTC 39299
Score = 107 bits (118), Expect = 3e-17
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 428995 ACAACGATATCCGCGGCCAAAAGCAGTCGACCCAGCGGTCGGGCAAGCCCACCAAGGGCG 429054
||||||| || ||| ||| |||| | | ||| | |||| ||||| ||||
Sbjct 39966 ACAACGACATTGCCGGTCAACCGCAGGCCATGCAGTCGAGCGGCAGGCCCATCAAGTCGA 39907
Query 429055 TCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCG 429114
|| | ||| || ||||| ||||| ||||| ||||||| || | ||||||||||| |
Sbjct 39906 TCCGTGCGCGTTTGAAGGGAAAGGAAGGCCGTCTCCGCGGAAACTTGATGGGCAAGCGTG 39847
Query 429115 TCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGG 429174
||||||| |||| || ||||||| | |||||| | |||| | |||||||| |
Sbjct 39846 TCAACTTCTCGGCCCGAACCGTCATTACCGGTGACCCCTTACTCGAGCTCGACGAGGTCG 39787
Query 429175 GCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226
| |||||| | |||| | | ||||||| ||||||||| ||||||||
Sbjct 39786 GTGTGCCCAAGTCCATCGCCCGTAACCTCACCTATCCCGAGCGTGTGACGCC 39735
Score = 100 bits (110), Expect = 5e-15
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081
|||||||| || |||||||| ||||||||| ||| || |||| | | ||| |
Sbjct 38500 CCCGAGAGTCGTGGCTTTGTCGAGAACTCGTACCTGCGAGGTCTCACGGCTCAAGAGTTC 38441
Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141
|| | ||| || | ||| || || ||||| ||||||||||||||||||| ||||||
Sbjct 38440 TTCTTCCACGCCATGGCCGGTCGAGAAGGTCTTATCGACACGGCCGTCAAGACCGCCGAG 38381
Query 431142 ACGGGCTACATCCAGCGTCG 431161
|| || ||||||||||||||
Sbjct 38380 ACCGGTTACATCCAGCGTCG 38361
>seq2
Length=1671606
Score = 116 bits (128), Expect = 6e-20
Identities = 308/465 (66%), Gaps = 4/465 (1%)
Strand=Plus/Minus
Query 2018913 CTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCAC 2018972
|| || ||| | |||||||| | || | |||||||| | || |||||| || ||
Sbjct 303178 CTGCCCTGGGTAGAAAAGTATAGGCCCATGCGACTCGACGATGTGGTCGGCAACAAGGAC 303119
Query 2018973 GCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCG 2019032
|| | | | |||||| | | |||||||||| || | || | | ||
Sbjct 303118 ACCATCGACCGCCTCAAAGTAATTCAGAACGACGGCAACTGTCCGCATCTGCTCATCTCG 303059
Query 2019033 GGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGC 2019092
||| |||||||| ||||| ||||| | |||||| || || | || ||||||
Sbjct 303058 GGCTTGCCCGGCATTGGCAAAACCACCTCGGTGCTGTGCCTCGCTCGTGCACTTTTGGGC 302999
Query 2019093 GCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152
| || | | || | |||||||| ||||| || || |||||||| || || || ||
Sbjct 302998 GATGCGTACAAGGAAGGTGTGCTCGAGCTCAACGCTTCCGACGAGCGAGGTGTCGATGTG 302939
Query 2019153 GTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCAC 2019212
||||| | | |||||| ||| ||| | | || || || || || | |||
Sbjct 302938 GTGCGCAACAAAATCAAGACGTTTGCTCAGAAGAAAGTCTCGCTCCCACCAGGAAGGCAC 302879
Query 2019213 AAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGA 2019272
||| | ||||||||||| ||||||||| || | ||| | || || |||||||| || ||
Sbjct 302878 AAGATCATCATCCTCGACGAGGCCGACAGCATGACGCCCGCAGCGCAGCAGGCTCTGCG- 302820
Query 2019273 TCG-ACCATGGAAAAGTACACCAACACGACGCGGTT-TGCGCTGGCCTGCAACACGTCGT 2019330
||| |||||||| | || ||||||| || || || ||| | || |||||| |
Sbjct 302819 TCGAACCATGGAGATTCACTCCAACACCACCCGCTTCTGC-TTCGCTTGCAACCAGAGCA 302761
Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCT 2019375
| | ||||||| | | || | | ||||||||||||||||
Sbjct 302760 ACAAGATCATCGAGCCGATTCAATCCAGATGCGCCATCTTGCGCT 302716
>seq17
Length=605135
Score = 89.7 bits (98), Expect = 8e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||||||||| | ||||||||| | || ||||| ||||||||||||||||| || |
Sbjct 370908 AGGTCGACCAGGAAATGCTCTTTGAGATCATTCTCGCTGCCAACTACCTCGACATTAAAC 370849
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
||||||||||| | || |||||||| |||
Sbjct 370848 CCCTCCTCGATGTCGGCTGCAAGACTGTG 370820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916243527886853
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