Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq11 104 2e-17
seq17 84.2 1e-11
>seq11
Length=790822
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||| || || || ||| || || ||||||||||||||
Sbjct 631737 ACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 631678
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| || | || || |||||||| || | |||||||||||| | ||
Sbjct 631677 AAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGG 631618
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| ||| || | | || | ||| | |||||| || ||||
Sbjct 631617 GATACCCTCCTTGTCTTGAATCTT-GGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCA 631559
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | |||||||| ||||| || | || || ||||||||||||||
Sbjct 631558 CCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 631510
>seq17
Length=605135
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || | | ||| || ||||| || || || ||| || || |||||||| ||||
Sbjct 221943 CACCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 222002
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| |||| || | || ||||| ||||| || | ||||||||||| | |
Sbjct 222003 AAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTG 222062
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| ||||| || || | | || | ||| | |||||| || ||
Sbjct 222063 GGATGCCTTCCTTGTCTTGGATCTT-GGCCTTGACGTTGTCGATGGTGTCAGAGGACTCG 222121
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || || || || | || || ||||||||||||||
Sbjct 222122 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703891835840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |