Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq11 87.8 4e-12 >seq11 Length=790822 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || |||||||| | || ||||| ||| ||| Sbjct 631513 CAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGAC 631572 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || || || || Sbjct 631573 ACTATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAGCAG 631632 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| | || || || | || | ||||||||||| || Sbjct 631633 CGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTACAACATC 631692 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 631693 CAGAAGGAGTCGACCCTCCACCTGGT 631718 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||||||||| |||||||| |||| || || ||| ||| Sbjct 631741 CAGATTTTCGTCAAGACGCTCACAGGAAAGACGATCACACTGGAGGTCGAGTCTTCGGAC 631800 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| ||||| || || || || || || ||| ||| || Sbjct 631801 ACGATCGACAATGTGAAAGC-CAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAGCA 631859 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| || ||||| || |||||| | || || || | ||| | |||| |||||| | Sbjct 631860 GCGACTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAACAT 631919 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||| || | |||||||| Sbjct 631920 TCAGAAGGAGAGCACGTTGCACCTTGT 631946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820391163867