Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq19 194 2e-44
seq11 89.7 5e-13
>seq19
Length=580969
Score = 194 bits (214), Expect = 2e-44
Identities = 997/1551 (64%), Gaps = 68/1551 (4%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCT-GAGATACACATTGCTAGTGAAAGG 146951
|| ||||| || ||||| || || |||||||| | ||| || | ||| ||| ||||
Sbjct 519559 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAG-TAGATGTTGGACGTGTAAGG 519617
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || ||| | || || || | ||||| |||||| || |
Sbjct 519618 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 519677
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTCC 147069
|| | || || |||||||||| | ||| ||| |||| | | | | |||||||
Sbjct 519678 CAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGA--GCTCGGCCCAGTCC 519735
Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
|| | |||||| || ||| ||||||||||||||| ||| | || | |||||
Sbjct 519736 CAGAGGTCCGAGGGGGTGACGC-CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGC 519794
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189
||| ||| | || |||| | |||| |||| |||| || || | ||||||
Sbjct 519795 GAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGA 519854
Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTCT 147247
|| | | ||| ||||| ||| ||| || ||| || |||| || || ||
Sbjct 519855 GCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGA--GCCTCGGGAGACT 519912
Query 147248 CGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306
| ||||| || | || | || ||||| ||||| | |||||||| ||||| |||||
Sbjct 519913 CA-AAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATG 519971
Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATA 147366
|| || || |||| || || | | | ||| |||| |||| || ||
Sbjct 519972 GGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATG 520031
Query 147367 ATCTTGTTGAGGTTAC-GCACTACAACTTTAGTTA--TTGTTTTGA-GTTTCTCGAAATC 147422
|||||||| ||||| ||| | | || | | | || || |||| ||| ||
Sbjct 520032 ATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGTTT---GAAGTC 520087
Query 147423 ATAAGTCCCGTCTT--CGACACGTACGCATT--GGTTC--ACGGCGATAGACGCCAGATT 147476
|| |||||| |||| | || || ||| | |||||| || |||| ||
Sbjct 520088 GTA-----CGTCTTGGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGCCAAGTT 520141
Query 147477 GCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCA 147536
|||||| ||| ||| |||| | ||||||||| | || |||| ||||| |||| |||
Sbjct 520142 GCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCA 520201
Query 147537 TTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCAT 147596
|| ||| || | || | ||| ||||| || || || || || ||| |||| ||
Sbjct 520202 CTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGAT 520261
Query 147597 GTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGCGCTC 147655
| | || |||||||||| |||| || | ||| | || || | ||| ||
Sbjct 520262 GAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCTGGGCCT 520320
Query 147656 GCACCCGCTGCCGATAGC--GGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTC 147713
|| | ||| | || |||||||| ||||| |||||||| | |||||||||||
Sbjct 520321 TGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTC 520378
Query 147714 GTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTC 147773
|||||||||||| || || |||||||| |||| | || ||||| |||||||| | |
Sbjct 520379 GTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCC 520438
Query 147774 GTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCG 147833
|| | | || | ||| || ||||| |||||||| || ||||| | || || ||
Sbjct 520439 GTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCG 520498
Query 147834 CGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTC 147890
|| ||| ||||| ||| ||| || | | | || | | ||| |||
Sbjct 520499 GGC-ACGCACCTCCTCCTTGCCGTGGTT--CTTGCGGAGGTCGAGGAACTCAAAGACGTC 520555
Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947
| |||||| || |||| ||| | ||| | ||||| |||| || || ||||||||
Sbjct 520556 CGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTC 520615
Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAG-TGC 148006
||| | ||| | ||||||| || ||||| | |||||| | | ||| | || | |
Sbjct 520616 GACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTGCTGACAC 520674
Query 148007 CGTTGGT----GGAAT---TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059
||||||| | ||| || | | |||||||| ||| ||| | ||| | |
Sbjct 520675 CGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCA----GTGGATGTTGAGG 520727
Query 148060 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGC 148117
|| || || ||| || ||| || || || ||| || | | || ||||||||
Sbjct 520728 CCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCGTAGATGC 520785
Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177
| ||||| ||||| || | | | | || ||||| | | || || | | |
Sbjct 520786 CATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGG 520845
Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237
| || || ||| |||||||| ||||| ||||| | ||||| ||| | | |
Sbjct 520846 TACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGT 520905
Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297
| |||||||| ||| |||||||| | |||||| || || | ||||| ||||||||||
Sbjct 520906 AGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCA 520965
Query 148298 TGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGG 148357
||||||| || || || || || | |||||| ||| || || ||||| |
Sbjct 520966 TGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCG 521025
Query 148358 TTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| ||| | || ||| | ||||| | || || ||||||| ||||||||
Sbjct 521026 TCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCG 521076
>seq11
Length=790822
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||| ||| | ||| || || || ||||| || |||| |
Sbjct 631703 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 631644
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||| || || || || || || || ||| || || |
Sbjct 631643 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACG 631584
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| |||| | |||||| |||| || | ||| ||||| |||||||| ||
Sbjct 631583 TTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 631524
Query 132110 ATGAAAATCTGCATGAC 132126
| || |||||||||||
Sbjct 631523 ACAAAGATCTGCATGAC 631507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611039143720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |