Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq8 105 6e-18 >seq8 Length=837966 Score = 105 bits (116), Expect = 6e-18 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| ||||| |||||| || ||||| |||||||| ||||| Sbjct 244551 GCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAGAAGGCGAGGACGTGCG 244492 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | |||| ||||| |||||||| || || |||| |||||| | | |||||||| | Sbjct 244491 AGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGATCCTTGGAAA 244432 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||||||||||| | ||||| || | | ||||| |||||| ||||| |||| Sbjct 244431 GGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCC--AGAT 244374 Query 110892 CT 110893 || Sbjct 244373 CT 244372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094249780640