Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1 181 1e-40
>seq1
Length=2009762
Score = 181 bits (200), Expect = 1e-40
Identities = 466/707 (66%), Gaps = 56/707 (8%)
Strand=Plus/Minus
Query 146840 TGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGT 146899
|||| ||||| || |||| | |||| ||| ||||||||||||||||| | || |
Sbjct 1711192 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1711133
Query 146900 TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959
|| ||| ||| | |||| || || ||||| | |||||||||||| || ||||
Sbjct 1711132 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1711073
Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019
|| | |||| || || || | ||||||| | ||| | ||||||||| | ||
Sbjct 1711072 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1711013
Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079
| | |||||| || |||||||| || || |||| || | || | || | ||||||||
Sbjct 1711012 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCATGAACGCTGGTACA 1710953
Query 147080 GCTGGCACGAGAGCT--------CCC----------------CGTCG------GCCACGT 147109
|| |||||||| | ||| ||||| | |||
Sbjct 1710952 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1710893
Query 147110 AAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTC 147168
| ||||| ||| | ||||||||||||||||||||||| |||||| |||||||
Sbjct 1710892 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1710834
Query 147169 CAGGCCGAGACCACCAGCCGCCTGCTCTCGG---GGTTCCTCTTAATCTCTTCGATAACC 147225
||||| || || | || | | |||| |||| |||| |||| |||||
Sbjct 1710833 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGAT---- 1710781
Query 147226 CACCTCAGC----TGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCT 147281
||| | ||| || || ||||| || || |||||| || |||| || ||||
Sbjct 1710780 CACTTGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTC 1710721
Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341
|| |||||||| | ||| ||||| ||||| || || |||| |||||| |||| ||
Sbjct 1710720 TGCGCCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-----TTCTCTG 1710666
Query 147342 CG---AGA-AGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCC 147396
|| ||| ||||||| || | ||| || || | || |||| | |||||||||||
Sbjct 1710665 CGGTGAGACAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGT 1710606
Query 147397 ACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCC 147456
|| ||||| | | |||| || || || || ||| | |||||||| ||||||
Sbjct 1710605 ACGCCCTTATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCC 1710546
Query 147457 TCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503
|| | || || | ||||||| | ||||||||| ||||| || ||
Sbjct 1710545 TCGAGCACGCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1710499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487803072800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |