Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11 114 1e-20 seq17 104 2e-17 >seq11 Length=790822 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593 || ||||| |||||||| ||||||||||| |||| | || || |||| || |||||| Sbjct 631940 TGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGC 631881 Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 ||||| || || || | ||||||||||| | || | | |||||||||| |||||| Sbjct 631880 TTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTG 631821 Query 35654 TGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTC 35713 |||| | | | | |||||| || || ||||||| |||||||| || || || Sbjct 631820 GCTTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTG 631761 Query 35714 AAAGTTTTCACAAATATCTGCAT 35736 | || || || || |||||||| Sbjct 631760 AGCGTCTTGACGAAAATCTGCAT 631738 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || |||| || |||||||| || ||||| Sbjct 631701 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 631642 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | || | | ||||||||| ||||| ||| | || Sbjct 631641 GATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGA-CGT 631583 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| ||||| |||| ||| || | Sbjct 631582 TGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGA 631523 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 631522 CAAAGATCTGCAT 631510 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593 || || || |||||||| ||||||||||| || | | || || | || ||||||||| Sbjct 632168 TGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGC 632109 Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 ||||| ||||| ||||| ||||||||||| | ||| | | |||||||||| |||||| Sbjct 632108 TTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTG 632049 Query 35654 TGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 ||| | |||| | | || || || || || || | ||| || || || ||||| Sbjct 632048 GCCTTGA-CGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGT 631990 Query 35713 CAAAGTTTTCACAAATATCTGCAT 35736 | || || ||||| || ||||| Sbjct 631989 GAGCGTCTTGACAAAGATTTGCAT 631966 >seq17 Length=605135 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || |||||||| || | Sbjct 300015 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 300074 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | |||| || ||||||||||| || || |||| ||||||||||| | || Sbjct 300075 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 300134 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | | | | | ||||| || || ||| Sbjct 300135 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 300194 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || |||||||| | || || || || |||||||| Sbjct 300195 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 300241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793447857160