Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 >seq11 Length=790822 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||||||||| || | || | || ||||| || || ||||| ||||||||| Sbjct 631964 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 631905 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| |||||||| ||||| ||| ||||||| ||||| || || ||||| Sbjct 631904 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 631845 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||||| ||||| | || | ||||| | | || || Sbjct 631844 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 631785 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || || || || || || || || |||||| Sbjct 631784 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCATA 631737 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||| ||| | | |||| |||| || ||||| || ||| Sbjct 631706 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 631647 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| ||||| || || | |||||| || || |||||| || Sbjct 631646 GCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTG 631587 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | || || || || || || | || || |||||||| Sbjct 631586 ACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTC 631527 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 631526 TTGACAAAGATCTGCAT 631510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934260170024