Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq8 102 3e-16 seq19 86.0 2e-11 >seq8 Length=837966 Score = 102 bits (112), Expect = 3e-16 Identities = 127/173 (73%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| || ||||| ||||| | || ||||| | || || |||| ||| Sbjct 244770 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 244829 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||||||||||||| | || ||||| || || |||| |||||| ||||| ||||| Sbjct 244830 -GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGA 244888 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 || ||| || ||||| ||| |||| |||||| ||||| || |||| || Sbjct 244889 GCTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCA 244941 >seq19 Length=580969 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184 |||||| ||||||| ||||||||||||| | | || |||||||| |||||| | Sbjct 519712 AGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGA 519653 Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244 || ||| ||||| || | || || |||| || || ||||| ||| ||||| Sbjct 519652 CCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGC 519593 Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTAC 256304 | || || | | |||| |||||| |||||||||| | ||| | ||| | || | Sbjct 519592 GTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGT-C 519534 Query 256305 GA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAAT 256344 || | |||||||||||||| | |||| | | ||||| || Sbjct 519533 GAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATCAT 519493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335450535015