Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq8 102 3e-16
seq19 86.0 2e-11
>seq8
Length=837966
Score = 102 bits (112), Expect = 3e-16
Identities = 127/173 (73%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759
|||| |||||| || ||||| ||||| | || ||||| | || || |||| |||
Sbjct 244770 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 244829
Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819
||||||||||||||| | || ||||| || || |||| |||||| ||||| |||||
Sbjct 244830 -GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGA 244888
Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872
|| ||| || ||||| ||| |||| |||||| ||||| || |||| ||
Sbjct 244889 GCTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCA 244941
>seq19
Length=580969
Score = 86.0 bits (94), Expect = 2e-11
Identities = 153/221 (69%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184
|||||| ||||||| ||||||||||||| | | || |||||||| |||||| |
Sbjct 519712 AGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGA 519653
Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244
|| ||| ||||| || | || || |||| || || ||||| ||| |||||
Sbjct 519652 CCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGC 519593
Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTAC 256304
| || || | | |||| |||||| |||||||||| | ||| | ||| | || |
Sbjct 519592 GTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGT-C 519534
Query 256305 GA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAAT 256344
|| | |||||||||||||| | |||| | | ||||| ||
Sbjct 519533 GAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATCAT 519493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335450535015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |