Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq19 201 1e-46
seq8 93.3 5e-14
>seq19
Length=580969
Score = 201 bits (222), Expect = 1e-46
Identities = 905/1419 (64%), Gaps = 30/1419 (2%)
Strand=Plus/Plus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|||||||| ||||| | | | ||||||||| | ||||| || || ||||| ||
Sbjct 519571 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 519630
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|| || | ||| || ||| ||||| || ||||| || || | || ||| |||
Sbjct 519631 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 519690
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT 110860
|| ||||| | || ||| ||||||| | ||||||| || | | ||
Sbjct 519691 CGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAGGGG 519750
Query 110861 -TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGT 110919
| || |||||||||| |||| ||| | || || || ||||| || || | ||||
Sbjct 519751 GTGACG--CCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGT 519808
Query 110920 TTCATAGGAACCTTGGGCTTCAGCCAATTCACA-GCTCGCCTCCAGGGATGCGTGATACA 110978
|| |||| || || | ||||| || || | |||| || || | ||||| || |
Sbjct 519809 CTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTGGTAGA 519867
Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038
|||| || |||||| | | || | || || || ||||| |||||||
Sbjct 519868 TGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGCCCA 519927
Query 111039 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098
| || || | || || ||||| || ||||| | ||| || || | ||| ||||| |
Sbjct 519928 TGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGT 519987
Query 111099 TAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158
| || || || ||| ||||| || | || |||| |||| ||| || || |
Sbjct 519988 TGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTCT 520047
Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGT----GCGAGTCTCT 111214
|| | ||| | || || || || || | || | || |||| |
Sbjct 520048 TGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGT 520107
Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274
|| || | | || |||||||| || ||||| ||||| |||||| ||| ||
Sbjct 520108 CGAT-GA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGG 520163
Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334
| ||||||| | ||| || || || |||||||| | ||| || || || | |||||
Sbjct 520164 GCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTC 520223
Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394
||||| ||||| ||| |||||||||||||| ||| |||| | || ||||| |||
Sbjct 520224 TGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTC 520283
Query 111395 TGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCC 111453
|| || | ||| || || | ||| | | || | | || | || || ||||| || ||
Sbjct 520284 TGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGCACGGCC 520342
Query 111454 CTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACC 111513
||| |||||||| ||||||| |||||||| || || ||| | ||| ||
Sbjct 520343 CTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCC 520402
Query 111514 TGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAA 111573
|| || || || || | || ||||| | || | ||| |||| |||||||||
Sbjct 520403 GGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAA 520462
Query 111574 AAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTG 111633
|| || || | ||| || | | ||||| |||| || |||| || | || ||
Sbjct 520463 GAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTG 520522
Query 111634 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 111693
||| || | || |||||||| | || |||| |||||||||||||| || | ||
Sbjct 520523 GTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGC 520582
Query 111694 GATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747
| | || ||||| ||| | || | || ||||| || ||| ||| ||
Sbjct 520583 AAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAA 520639
Query 111748 TACGCGAAGCATTGGAATAATACCAT--CTGATTGACCATTTGTCCCCCGAATACGAGAT 111805
||||| ||||| || | ||||| | |||| ||| || || || ||| ||
Sbjct 520640 GACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATGTAGGAA 520697
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
|| | | | ||||||| | || ||||| || || ||| |||||
Sbjct 520698 CCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATG 520757
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
|||||| | | || || | ||||| || | ||| ||||| ||||| ||| || |||
Sbjct 520758 GCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGG 520817
Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985
||||| || | ||| || || ||||| || ||||||||||| || | |||||
Sbjct 520818 AAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGT 520877
Query 111986 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044
| || ||| ||| ||||| || ||| ||||| | | | || ||||| | ||
Sbjct 520878 GT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCC 520936
Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||||| |||| ||||| ||||||| ||||| ||| ||
Sbjct 520937 GTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 520975
>seq8
Length=837966
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| ||||| || || || || || || || || |||||| |||||
Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||
Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
|| || || ||||| || | || || ||||||||
Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA 244770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031788039200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |