Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq19 194 2e-44
seq13 131 2e-25
seq8 107 2e-18
>seq19
Length=580969
Score = 194 bits (214), Expect = 2e-44
Identities = 905/1418 (64%), Gaps = 28/1418 (2%)
Strand=Plus/Plus
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214
|||||||| ||||| || | | ||||| |||| |||||| ||||| ||||||||
Sbjct 519571 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 519630
Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274
||| || | ||| || || ||||| ||||||||||| || | ||||| |||
Sbjct 519631 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 519690
Query 118275 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT 118331
|| ||||| ||| | | || ||||||| || ||||||| || | |
Sbjct 519691 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 519747
Query 118332 GTC-TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 118390
| | | | |||||| || |||| || ||| || || || ||||| || | |
Sbjct 519748 GGGGTGACGC--CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTA 519805
Query 118391 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGAT 118449
||||| || | ||| | || |||| ||| | | |||| ||||| || ||||| |
Sbjct 519806 GGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTGGT 519864
Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGT 118508
| || || || || || | | || | |||||| || ||||| ||| ||
Sbjct 519865 AGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGC 519924
Query 118509 CGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 118567
| || | || || | || || ||||| |||||||||| || || || || || |
Sbjct 519925 C--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCG 519982
Query 118568 CATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627
||| || || || || ||| ||||| || | || | ||||| | | | || ||
Sbjct 519983 CATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAG 520042
Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGAGTC 118685
|| ||| || |||| | || || || || || | | || | || | | |
Sbjct 520043 GTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGAC 520102
Query 118686 TCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 118744
|| ||| | | || |||||||| || |||| || || |||| ||| ||
Sbjct 520103 GGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTC 520159
Query 118745 CTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTT 118804
| ||||||| ||||| || ||||||||||| || | ||| |||||||| | |||
Sbjct 520160 GGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTT 520219
Query 118805 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 118864
||| || || ||| |||| ||||||||||| || ||| | || | || |||||
Sbjct 520220 CTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTC 520279
Query 118865 CGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTC 118923
|| || |||| ||| || || | ||||| | || | || | || ||| ||||| |
Sbjct 520280 GGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGCAC 520338
Query 118924 GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 118983
| ||||| ||||||| ||||||| |||||||| || || | || | ||
Sbjct 520339 GGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGA 520398
Query 118984 GCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 119043
| || || || | ||||| | ||| ||||| | || || ||| |||| |||||
Sbjct 520399 GGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCA 520458
Query 119044 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 119103
||||||| || || | |||||| || ||||||| || || || | || || | |
Sbjct 520459 TGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGC 520518
Query 119104 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 119163
| || || || | || | || || | || |||| |||||| || || | ||| |
Sbjct 520519 CGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAA 520578
Query 119164 CCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220
|| | | || ||| ||| |||||| || || | || ||| ||| |
Sbjct 520579 TGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGA 520638
Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT 119280
| || || ||||| || | |||||| | | || || || || ||| ||
Sbjct 520639 AGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGAAC 520698
Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340
|| | | || |||||||| | || ||||| || || ||| ||||| |
Sbjct 520699 CGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGG 520758
Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400
| ||| | |||| || ||||||| |||||||||||||| |||| | | || |||||
Sbjct 520759 CACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGA 520818
Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460
|||| ||| | ||||| || ||||| ||||||||||| || || | |||||
Sbjct 520819 AGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTG 520878
Query 119461 TGAACATAC-CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCG 119519
| || ||| ||| ||||| || ||||||||| | | || ||||| | |||
Sbjct 520879 T-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCG 520937
Query 119520 TGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
|| ||||||| | ||| ||||| | ||||| |||||
Sbjct 520938 TGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 520975
>seq13
Length=681008
Score = 131 bits (144), Expect = 2e-25
Identities = 225/327 (69%), Gaps = 0/327 (0%)
Strand=Plus/Plus
Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792
||| || ||||| || | |||| || || | |||| |||||||||||| ||||| ||
Sbjct 284151 CTTTAGCAGCGAAGGGTAAAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 284210
Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATC 179852
||| |||| |||| ||| ||||| | ||| | | || || || || | || ||
Sbjct 284211 ACCGTCGTGATCCTGATCGGTCATGACCATGATGCTGCCGTATCGCAGACTGTTCACGTC 284270
Query 179853 TTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT 179912
|||| | ||| || || || ||||||||||||| ||||| | |||| ||| |||
Sbjct 284271 AAGATACTGCTTGCCGTGCTGCAGACCCAAGATCTCCTTGATGGCCTTGATCTCGGCGTT 284330
Query 179913 TGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAA 179972
||| || | || || || ||||| || ||| |||||||| |||||
Sbjct 284331 CTTCATGATCTGATCGTGAGAGGCTTCACGGACGTTCAAGAGCTTACCACGGAGCGGGAA 284390
Query 179973 CACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGA 180032
||||||||||| || | || ||| | || |||||| || ||||| | ||| || ||
Sbjct 284391 CACACCGTAGTTGTCTCTTCCGACCTCGACGATACCAGCGACGGCGAGCGACTTGGCCGA 284450
Query 180033 ATCACCCTCCGTCACGATGAGCGTACA 180059
||||| || || | ||||||||| ||
Sbjct 284451 GTCACCTTCGGTGAGGATGAGCGTGCA 284477
>seq8
Length=837966
Score = 107 bits (118), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| ||||| ||||| || |||||||| || || |||||| |||||
Sbjct 244928 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 244869
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||||||||| |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 244868 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 244809
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC-A 130192
|| || || || || || | ||||||||| || |||| ||| | |||| |
Sbjct 244808 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG--CTTGTCGCTG 244751
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| ||| || |||||| | || || | || || |||| ||||| || || |||
Sbjct 244750 ATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 244691
Query 130253 AAGAG 130257
|||||
Sbjct 244690 AAGAG 244686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434991278120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |