Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq19 257 2e-63
seq13 154 2e-32
seq8 132 6e-26
>seq19
Length=580969
Score = 257 bits (284), Expect = 2e-63
Identities = 903/1392 (65%), Gaps = 30/1392 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| || ||| ||||||| || || | ||||| || | |
Sbjct 520975 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 520916
Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||| ||| ||| || | ||||| | || ||||||||
Sbjct 520915 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 520857
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || ||||| || || || | || |||||||| || ||| ||||| ||
Sbjct 520856 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 520797
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | || ||||| | || || | | |||||| ||||| ||| || ||
Sbjct 520796 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 520737
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || | ||||||| | | | || || ||| || || ||
Sbjct 520736 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 520677
Query 104521 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 520676 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 520619
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| | || | ||| ||||| || | | || | || |||||||||||
Sbjct 520618 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 520562
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||| |||| || | |||||||| || | || ||||| || | ||||||| |||
Sbjct 520561 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 520502
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| || ||||||| ||| |||||| | || ||||||||||||||||| || ||| ||
Sbjct 520501 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 520442
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| ||| | ||||| ||| | || || || || || || ||| | || | ||
Sbjct 520441 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 520382
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-ACGGT 104871
|| |||||||| ||| ||| ||||||| || || || || | ||| || ||
Sbjct 520381 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCA-AGCGCACCGT 520323
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || | || | | ||| | || || ||| |||| || |||||||| || | || |
Sbjct 520322 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 520264
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
||| || ||||| || ||| ||||| ||||| || || ||||| | || ||||
Sbjct 520263 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 520204
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| | ||||| | || || || || | || | | | | || ||| |||||| |
Sbjct 520203 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 520144
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110
| ||| | || || ||||| ||||||| | | || || | | ||||| | || |
Sbjct 520143 GCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTACGACT 520084
Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170
|| || ||||| || | || | || ||| ||||| |||| | || || |
Sbjct 520083 TCAAACGTCTGCACGAGGTCGCCAAGGCCATCTGCAAGAACCTTAACAAGATCATCGACA 520024
Query 105171 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230
|| | |||||||| ||| || ||| ||| || ||| | |||||||| || |||
Sbjct 520023 TCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCCATCGGTA 519964
Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCGA 105288
||||||| |||||||| || || | ||||| || | | || |||| ||||| ||
Sbjct 519963 TCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGG--GCTACGCCTTTGAGTCTCC 519906
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
||| || |||| | || || || |||||||| || ||||||||||| || ||
Sbjct 519905 CGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTCGA-GC 519847
Query 105349 GA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|| || | ||| |||| || | || | || || |||| | || || || |||
Sbjct 519846 GATCGTGC-GAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCT 519788
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGACTG 105465
|| || || | ||| || | || ||||||| || | || | | || |||||
Sbjct 519787 TCGCAGGGTGAGCTGCAGTACGACATGTGGG--CGTCACCCCCTCGGACCTCTGGGACTG 519730
Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
|| | ||||||| ||| || | ||||| || ||| || || | |||||
Sbjct 519729 GGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCC 519670
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
||||| || ||||| ||| || ||| | || || || ||||| || || |||||
Sbjct 519669 CATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACAC 519610
Query 105586 GACGAACATCTA 105597
| | ||||||||
Sbjct 519609 GTCCAACATCTA 519598
>seq13
Length=681008
Score = 154 bits (170), Expect = 2e-32
Identities = 210/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| ||||||||||||||||| |||||||||| ||| ||| ||||||| |||||
Sbjct 284185 TTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATG 284244
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
| || || || || | || || |||| | ||| || || || ||||||||||||
Sbjct 284245 CTGCCGTATCGCAGACTGTTCACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATC 284304
Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339
| ||||| | |||| ||| ||| ||| ||| | |||||| || || ||
Sbjct 284305 TCCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACG 284364
Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399
||| ||| ||||| || ||||| |||||||||| || | || || || || |
Sbjct 284365 TTCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATA 284424
Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
|| ||||| ||||| | ||| ||||||||||| ||||||| ||||||||| ||
Sbjct 284425 CCAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCA 284477
>seq8
Length=837966
Score = 132 bits (146), Expect = 6e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857
|| || ||||| ||| |||| ||||| ||||| || ||||||||||| || ||||||
Sbjct 244770 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 244829
Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917
| | || | |||||||||||||| ||||||||||| |||||| |||||||||||||
Sbjct 244830 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 244889
Query 94918 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|| ||||| || ||||| || || ||| || |||||
Sbjct 244890 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGC 244927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260603149480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |