Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq15 196 1e-44 seq11 129 2e-24 seq1 100 9e-16 >seq15 Length=634981 Score = 196 bits (216), Expect = 1e-44 Identities = 590/904 (65%), Gaps = 13/904 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | |||||||| || || |||||||| || |||||||| || ||| Sbjct 461224 GCCATCGGTATCGATCTTGGTACTACCTACTCGTGTGTTGCCGTCTGGCAAAACGACCGT 461283 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || ||||| || || || ||| Sbjct 461284 GTCGAGGTCATTGCCAACGACCAGGGTAACCGCACCACTCCCTCATATGTCGCCTTCACC 461343 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| | || ||||| |||| || || || | ||| || || | || Sbjct 461344 GACTCGGAGCGTCTCATCGGTGACGCTGCCAAGAACCAGGTCGCTATGAACCCCCACAAC 461403 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || || || || || ||||| || |||||| | ||||| | || | | | || Sbjct 461404 ACCGTCTTCGACGCCAAGCGTCTCATTGGTCGCAAGTTCGACGATGCCGAGGTT---CAG 461460 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || | || || | ||||| || || | | ||||| || || || Sbjct 461461 TCCGACATGAAGCACTGGCCTTTCGAGGTCGTCACG---GTCGGTGGCAAGCCTCAGATC 461517 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | || || || ||||| | || || |||||||| || || || |||||| Sbjct 461518 CGTATCGAGTACAAGGGTGAGAAGAAGACCTTCACCCCCGAAGAGATCTCGTCGATGGTT 461577 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | | || ||| || | || || || || | |||| || || | ||||| || Sbjct 461578 CTCCTCAAGATGCGCGAGACCGCCGAGGCCTACCTCGGTGGCACCGTCAAGGATGCCGTC 461637 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || || ||||| || || || | |||||| || || || ||||| || | | Sbjct 461638 GTCACCGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGATGCCGGTATC 461697 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || |||| | || || | |||| || || || ||||| || || || || || || Sbjct 461698 ATCTCGGGCCTCAACGTGATGCGAATCATCAACGAGCCCACCGCCGCCGCCATCGCTTAC 461757 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || || || | || ||| || | || |||| || || || || ||||||||| Sbjct 461758 GGTCTCGACAAGAAGACTGAGGGCGAGAGGAACGTTCTCATCTTCGACTTGGGTGGTGGT 461817 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 || || ||||| || || || || | || ||||| || || || || || || ||||| Sbjct 461818 ACCTTCGATGTCTCGCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACTGCC 461877 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || | ||||| || || || || || |||||||| || || || | Sbjct 461878 GGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTCCAG 461937 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| | || | | || | || | | || | ||||| | Sbjct 461938 GAGTTCAAGCG-CAAG-AACAAGAAGGACTTGACCTCCAACGCCCGTGCCCTCCGTCGTC 461995 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | | || || ||||| ||||| ||||| || | || || || |||| ||| | || | Sbjct 461996 TCCGCACCGCCTGTGAGCGTGCCAAGCGCACCCTCTCGTCGGCTGCCCAGACCACCATCG 462055 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | ||||| ||||| || |||| || |||| | || || || |||||||| || | Sbjct 462056 AGATTGACTCTCTCTTCGAGGGCATCGACTTCTACACCTCGATCACCCGTGCTCGTTTCG 462115 Query 350094 AAGA 350097 | || Sbjct 462116 AGGA 462119 >seq11 Length=790822 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || ||||| Sbjct 631740 CATACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATC 631681 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || |||||||| ||||| ||||||||||| Sbjct 631680 GGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGG 631621 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || || ||||| || || || || || || || | || || | || Sbjct 631620 TGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTC 631561 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 631560 CACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 631510 Score = 122 bits (134), Expect = 3e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| || || |||| || ||||| || | || ||| || ||||| || | Sbjct 631972 TTTGCATACCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGT 631913 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || || ||||| || || || || ||||| | Sbjct 631912 AGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGT 631853 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || ||||| ||||| || |||| || || | Sbjct 631852 CAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAG 631793 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| | |||||||| || || || || || ||||||||||| Sbjct 631792 ACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 631738 Score = 104 bits (114), Expect = 7e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || || || || | || || ||||| || || || || |||||||| Sbjct 632157 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 632098 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| | || ||||| || ||||| || || || || ||||| || || || || || || Sbjct 632097 GATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 632038 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| | ||| || | || || || || |||| ||||| || || || || || || Sbjct 632037 GTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGAC 631978 Query 140726 AAAAATCTGCAT 140737 ||| || ||||| Sbjct 631977 AAAGATTTGCAT 631966 >seq1 Length=2009762 Score = 100 bits (110), Expect = 9e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| || ||||| ||||| || || || || || || Sbjct 1808610 ATACCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 1808551 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 1808550 GAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGG 1808491 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || |||||||| || || || ||||| | || | || || | || Sbjct 1808490 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCC 1808431 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || |||| ||||| || ||| || Sbjct 1808430 ACCTCGAGGGTAATGGTCTTACCTGTTGGT 1808401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253875816681