Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq19 367 1e-96
seq8 107 2e-18
seq13 100 3e-16
>seq19
Length=580969
Score = 367 bits (406), Expect = 1e-96
Identities = 544/763 (71%), Gaps = 6/763 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | ||||||||||| | ||| | | | | | |||||| |||
Sbjct 520962 TCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCCATTGAGACCTACA 520903
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| |||||||||||||| |||||| | || ||||| |||||||| |||||
Sbjct 520902 ACCTCATGTCGCAAAAGTACTTTACACACGCCTCCCCCACCCTCTTCAACGCAGGTACCC 520843
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
||||||||| | ||| |||||||| || | |||||||| ||||||||||| ||||
Sbjct 520842 CGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGACTCGATCGATGGCA 520783
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| ||||||| ||||||||| | ||||||||||| ||
Sbjct 520782 TCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCA 520723
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
|| | | |||| | | ||| | || || || ||||| ||| | | |
Sbjct 520722 ACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAACGGTGTCAGCAACG 520663
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| |||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct 520662 GTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTACGTCGACCAGGGTGGCA 520603
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | || ||||| ||| | ||||| |||||| | ||| | | ||||
Sbjct 520602 ACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCATGGCACTCGGACGTCTTTGAGT 520543
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671
| ||||| || || ||| || || | || ||| |||| ||| || || || |||
Sbjct 520542 TCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGTGCCCGAGAGCTCTTCTAC- 520484
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
|| || ||| | || || ||||||||| | | ||| ||| || ||| || |||| ||
Sbjct 520483 GCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCTC 520424
Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
|||||||| |||||||||||||||||| | | || |||||| || |||||| | |
Sbjct 520423 ATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTG-CTACGGCGACGAGTTTGAGCGCCT 520365
Query 53791 GTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849
|| || || |||| | ||||||| |||| | |||||||| | || | |
Sbjct 520364 CTA-CGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCGCACCGTCAAGGCCCAGAAGCTCT 520306
Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909
|| | || |||||| || ||| ||||| || | || | ||| ||||||||||
Sbjct 520305 GGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCTTCATCCTCTACAAGGATG 520246
Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
| | ||| |||||||||||||||||| ||||| ||||||
Sbjct 520245 CCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCAA 520203
Score = 149 bits (164), Expect = 7e-31
Identities = 529/811 (65%), Gaps = 37/811 (5%)
Strand=Plus/Minus
Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197
|||||| ||| | ||||||||| || |||||||| || | ||| || |||||
Sbjct 520046 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAA 519987
Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257
| | || ||||| ||||||| |||||||| ||||| | |||||| ||||||||| |
Sbjct 519986 CATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCAT 519927
Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316
|| | |||| || || ||||| | ||| | | |||||| || | ||
Sbjct 519926 GGGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC-CA 519868
Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATG-AGCGAGGGGACCTACGAG 55375
||||| || || |||||| ||||| | |||||| | ||| | || |||||||||
Sbjct 519867 TCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAGCAGC-ACGGCACCTACGAG 519809
Query 55376 ACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGG-----CA 55430
|| | | | ||||| ||| |||| || |||| ||| | |||| |
Sbjct 519808 ACCTACGCCGGCTCGCCCGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGCGTCACCC 519749
Query 55431 AGTCTGACCCCATG---TTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCA 55487
|| |||| | | | | | || | ||| | || | | || || ||||
Sbjct 519748 CCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCA 519689
Query 55488 ACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACG 55547
|||| || || | || || ||||| ||||| ||||| ||||||| | ||| |||||
Sbjct 519688 ACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACG 519629
Query 55548 AGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTG 55607
|| |||||||| |||||| ||||||||||| ||| || || || ||||||||
Sbjct 519628 AGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCC 519569
Query 55608 TCATGATCAACAA---GCACCTCGTCAAGGACCTGCAGAAGA-TCAACAAGTGGAACCCG 55663
|| | ||| | ||| | || | | || || || |||||||
Sbjct 519568 AGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCT----GTGGAACGAC 519513
Query 55664 CAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG---GAGATT 55717
||| |||| || || || | | |||| || ||| ||||||| || | ||
Sbjct 519512 ACGATGAAGAACCGCATCATCGCTC---ACGGCGGTTCCATCCAGAACGTGCCCGGCATC 519456
Query 55718 CCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777
|| || ||||| || | ||| ||| || |||||||| |||||| | ||
Sbjct 519455 CCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCCATCATC 519396
Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT---CTTC 55834
|||||| || || |||||||| | |||| |||||| ||||| || ||||| | ||
Sbjct 519395 GACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATTCACCTC 519336
Query 55835 ATGGAGAAT-CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|| | | |||| |||||| | | | |||||||||||| ||||| |||||||||||
Sbjct 519335 TCGGCGCCTACCTT---TGGCCA-GCTCACCTCGATGCACTTCTACGGCTGGAAGAAGGG 519280
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACC 55924
|||||||| |||| ||||| ||||| |||
Sbjct 519279 TCTCAAGACCGGTACCTACTACCTGCGTACC 519249
>seq8
Length=837966
Score = 107 bits (118), Expect = 2e-18
Identities = 328/498 (66%), Gaps = 22/498 (4%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| || ||||| || || |||||||| | ||| ||||||| |||||| || ||||
Sbjct 244873 AGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAG 244814
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924
||||||||||| || ||||||||||| || || | ||||| ||| || |||
Sbjct 244813 AAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA-AGTGGCGCGCTTGTC 244755
Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980
||||| | | ||||| || ||||| | ||||| | |||| || |||| ||
Sbjct 244754 GCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGC 244695
Query 74981 TTGGAAGAG--GCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAG 75038
| ||||| ||| || || ||||| || | | |||| || | || |||
Sbjct 244694 GTCAAAGAGGAGCTCGC--GCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAG 244637
Query 75039 TACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCT 75098
|| |||||||| || || ||| | | |||| | ||||||| | || |||||
Sbjct 244636 TAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCG 244577
Query 75099 GCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCG 75156
|| || || || ||||| || | ||| ||||| ||||||| ||||| |
Sbjct 244576 GCGGCTTGCACCTCGGAGCTGAAACGCTC--GACGAGGTTCTCGTTGACGATACCGTCGG 244519
Query 75157 AGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TT 75213
| |||||||| || || || || |||||||||||| || | ||| |||| |
Sbjct 244518 AAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGT 244459
Query 75214 TGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCC 75271
||||||| || | || ||| | | || ||||| ||| | |||||||| | ||
Sbjct 244458 TGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCC- 244400
Query 75272 AATC-GCCTTTTTGTACA 75288
|| |||||||||||||
Sbjct 244399 --TCGGCCTTTTTGTACA 244384
>seq13
Length=681008
Score = 100 bits (110), Expect = 3e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142
|||||| |||||||||||||| ||||||| ||||||||| || ||| | |||||
Sbjct 285384 GTTGGCGAGCTTGGCACCGTAACCGTTCCTACCACCGGTGACCTTGGCCTCGTTGTCGTC 285443
Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||| | ||||| ||||||||||||||||||||
Sbjct 285444 GTAGTTGGACGAGGTGAGGAGGTGACCAAAGATGAGCTCGGGGAT 285488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215815314600
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