Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq19 288 1e-72 seq11 167 3e-36 seq17 143 3e-29 seq1 132 5e-26 seq8 111 2e-19 >seq19 Length=580969 Score = 288 bits (318), Expect = 1e-72 Identities = 1132/1753 (65%), Gaps = 68/1753 (4%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||| | || |||||||| ||||||||||||||||| | |||||| || Sbjct 519250 GTACGCAGGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATCGAG 519309 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAG---ATGTTCAGAGACTGAGACTGACAG 80154 |||||| ||| || || | || || | ||||| || ||||| ||||| ||| Sbjct 519310 GTGAGCTGGCCAAAGGTAGG---CGCCGAGAGGTGAATGTTGAGCGACTGCGACTGGCAG 519366 Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACT 80214 |||||||| ||||| || || ||||| || || || | ||| || || ||||| || Sbjct 519367 ATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCCTTCTGGCTGATCTCCCAGACG 519426 Query 80215 GTACGATACACCTTAC-GAAGCTCCTCTGGAATGTC---CAGATTTTGCACACTGCCACC 80270 || || | ||| || || || || ||| | || || || | || || Sbjct 519427 GTCTTGTAGAGCTTCTTGATGCGG-TCGGGGATGCCGGGCACGTTCTGGATGGAACCGCC 519485 Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTT 80329 || | || | || |||| | | ||| ||| | ||| ||| | || || Sbjct 519486 GTGAGCGATGATGCGGTTCTTCA-TCGTGTCGTTCCACAGACCCTGCTCGACGAGCTCGC 519544 Query 80330 TCA-----CAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATA 80384 | ||||| ||| | || ||||| || ||||| |||||| || Sbjct 519545 GGAGCAACCAAGG-----GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTA 519599 Query 80385 CAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGC 80444 | ||| | ||||||||||| || ||||||| |||||||||||| || || Sbjct 519600 GATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGC 519659 Query 80445 CGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTC 80501 || ||||| || ||| || || || || ||||| |||||||| ||| | ||| Sbjct 519660 GGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTT 519719 Query 80502 GCGCAAATCTGACCAAAAATC----AACCCCAACGCTGTGAC-CCCACATGTCGTGCTGC 80556 | || || | ||| || | || | | ||||| |||||||||||| |||| Sbjct 519720 GAGC---TCGGCCCAG---TCCCAGAGGTCCGAGGGGGTGACGCCCACATGTCGTACTGC 519773 Query 80557 AAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCC 80616 | |||| ||| || || || || ||| | |||||||| | ||| | | || ||| Sbjct 519774 AGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCC 519833 Query 80617 AGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACA 80676 ||||| ||||| | || || ||||| || ||| ||| |||| | ||| | | Sbjct 519834 AGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGA 519893 Query 80677 CCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCC 80736 | || |||| || || || | ||||||| |||||||| |||| || || ||| Sbjct 519894 CGACGAGCCTCGGGAGACTCAAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCC 519953 Query 80737 TGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGG 80796 || || ||||| |||| || ||||||||| |||| ||||| ||||||| | ||| Sbjct 519954 TGGACACCGATACCGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGG 520013 Query 80797 TAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA-ACATCATG 80855 || |||| | ||||||| ||| ||||| | || | || || || || || Sbjct 520014 TAGTAGTTGATGTCGATGATCTTGTTAAGGTT-CTTGCAGATGGCCTTGGCGACCTCGTG 520072 Query 80856 AAGTTTCTGAAAGTCGAA----TTGGTTCCCCT-TC-ACAAATGCCGGAAGGCTCAGGGA 80909 || | |||||| | |||| | || | || | || ||| | || Sbjct 520073 CAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGA 520132 Query 80910 CGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAA 80969 |||| ||||| || |||||||| || | | | |||||| || || |||||||| Sbjct 520133 GGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAA 520192 Query 80970 ATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTT 81029 || || |||| || || || ||||| |||||||| |||| ||| || ||||| Sbjct 520193 GTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTT 520252 Query 81030 GTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTC 81089 |||| ||| | ||| | ||||||||| ||| |||| ||||||||||| ||| | || Sbjct 520253 GTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTT 520312 Query 81090 GCGCGCCTTGACCAC---CTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 | |||||||| |||| | | ||| |||||| | || |||| | | Sbjct 520313 CTGGGCCTTGACGGTGCGCTTG--GCACG-GCCCTCGGCCTCGTAGCGCTCGTA-GAGGC 520368 Query 81147 G-TCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 | || |||| | | |||| | ||| ||| |||| | ||||||||||| |||||||| || Sbjct 520369 GCTCAAACTCGTCGCCGTAGCAGT-CAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGC 520427 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264 ||||||| || | ||| || ||||||||| || || | |||||| ||| | Sbjct 520428 GACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAG 520487 Query 81265 AACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324 || || || ||| ||| ||||||| | || ||||| ||| | ||||| || || Sbjct 520488 AAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCA 520547 Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------G 81378 | || ||||| ||||||||||| | || | ||| | | || | |||| | Sbjct 520548 AAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACC---GGGACGCTTGTTG 520604 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 |||||||||| |||||| ||||| || ||| || || || | ||| || | |||||| Sbjct 520605 CCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG 520664 Query 81439 T--CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG 81496 | ||||| |||||| ||||| | || || || || |||| | | ||| Sbjct 520665 TTGCTGAC--ACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGT 520722 Query 81497 AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556 || ||||| ||||| | ||| || ||| |||||| || | || || || | Sbjct 520723 TGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGA 520782 Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 | || ||||| || | |||||| | | ||| || || | ||||||| Sbjct 520783 TGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCG 520842 Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676 | || || ||||| || || |||| ||||| | || || | ||||| |||| Sbjct 520843 GGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGT 520902 Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 ||||| || || ||| || || | ||||| ||||||| || |||||||| | Sbjct 520903 TGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGA 520962 Query 81737 ACATGTACTGGGG 81749 ||||| |||||| Sbjct 520963 GCATGTGCTGGGG 520975 >seq11 Length=790822 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||||||||| || |||||||| ||||| || || || ||||| Sbjct 631966 ATGCAAATCTTTGTCAAGACGCTCACGGGCAAGACCATTACGCTCGATGTCGAGTCCTCG 632025 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 632026 GATACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 632085 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || |||||||||||||| || ||||||| ||| || || | ||||| || Sbjct 632086 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACTCTTTCGGACTACAAC 632145 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||| | || || ||| | ||||| || || || Sbjct 632146 ATTCAGAAGGAGAGCACCTTGCACCTCGTCCTCCGTCTGCGTGGCGG 632192 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 631510 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 631569 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||| ||||||||||| || || || || ||| Sbjct 631570 GACACTATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAG 631629 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || ||||| | || ||||| | || || || Sbjct 631630 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTACAAC 631689 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | ||||| || ||||| Sbjct 631690 ATCCAGAAGGAGTCGACCCTCCACCTGGTCCTCCGTCTCCGTGGTGG 631736 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| || || ||||| || || || ||||| ||||| Sbjct 631738 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATCACACTGGAGGTCGAGTCTTCG 631797 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| || || || |||||||||||||| || || || |||||| Sbjct 631798 GACACGATCGACAATGTGAAAGCCAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAG 631857 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||||||||| |||||||| | ||||| || | ||||| || Sbjct 631858 CAGCGACTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAAC 631917 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||| | || || ||| | || | ||||| || Sbjct 631918 ATTCAGAAGGAGAGCACGTTGCACCTTGTCCTTCGATTGCGCGGAGG 631964 >seq17 Length=605135 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||||| || || || ||||| ||||| | Sbjct 222171 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 222112 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| || || || || || ||| Sbjct 222111 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 222052 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||| | || || || | ||||| || Sbjct 222051 CAGCGACTTATCTTTGCAGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAAC 221992 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || |||||||| || || || Sbjct 221991 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGCGTCTCCGTGGAGG 221945 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || ||||| ||||| ||||| Sbjct 300241 ATGCAGATCTTCGTTAAGACCCTCACGGGTAAGACCATCACTCTCGAGGTCGAGTCTTCG 300182 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 300181 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 300122 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||||||||| || ||||| | | ||||| | ||||| || Sbjct 300121 CAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGACGGCCACACCCTTTCGGACTACAAC 300062 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || | || || || ||||| Sbjct 300061 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 300015 >seq1 Length=2009762 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| ||||| || ||||| ||||| || | ||| ||| | ||||| Sbjct 1808405 ACAGGTAAGACCATTACCCTCGAGGTGGAGTCCTCGGACACCATCAACAATGTCAAGGCC 1808464 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| || || || ||||||||||| || || || || || ||| Sbjct 1808465 AAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAG 1808524 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | || || || | ||||| || |||| ||||| || ||||| || Sbjct 1808525 CAGCTCGAGGACGGCCGCACGCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTCCAC 1808584 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 1808585 CTTGTCCTCCGTCTGCGTGGTGG 1808607 >seq8 Length=837966 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774 ||||||||| || |||||| || ||||| || ||||| || || || ||| || | Sbjct 244777 AGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCA 244836 Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834 | |||||||| || ||||| || || ||||| ||||| | || || |||||||| |||| Sbjct 244837 TCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCT 244896 Query 64835 CTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG 64890 | || ||||| || || ||| || ||||| ||| ||||||||||||||| Sbjct 244897 CGCGCGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCAGCCACCTCAAG 244952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310207520240