Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq19 288 1e-72
seq11 167 3e-36
seq17 143 3e-29
seq1 132 5e-26
seq8 111 2e-19
>seq19
Length=580969
Score = 288 bits (318), Expect = 1e-72
Identities = 1132/1753 (65%), Gaps = 68/1753 (4%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||| | || |||||||| ||||||||||||||||| | |||||| ||
Sbjct 519250 GTACGCAGGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATCGAG 519309
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAG---ATGTTCAGAGACTGAGACTGACAG 80154
|||||| ||| || || | || || | ||||| || ||||| ||||| |||
Sbjct 519310 GTGAGCTGGCCAAAGGTAGG---CGCCGAGAGGTGAATGTTGAGCGACTGCGACTGGCAG 519366
Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACT 80214
|||||||| ||||| || || ||||| || || || | ||| || || ||||| ||
Sbjct 519367 ATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCCTTCTGGCTGATCTCCCAGACG 519426
Query 80215 GTACGATACACCTTAC-GAAGCTCCTCTGGAATGTC---CAGATTTTGCACACTGCCACC 80270
|| || | ||| || || || || ||| | || || || | || ||
Sbjct 519427 GTCTTGTAGAGCTTCTTGATGCGG-TCGGGGATGCCGGGCACGTTCTGGATGGAACCGCC 519485
Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTT 80329
|| | || | || |||| | | ||| ||| | ||| ||| | || ||
Sbjct 519486 GTGAGCGATGATGCGGTTCTTCA-TCGTGTCGTTCCACAGACCCTGCTCGACGAGCTCGC 519544
Query 80330 TCA-----CAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATA 80384
| ||||| ||| | || ||||| || ||||| |||||| ||
Sbjct 519545 GGAGCAACCAAGG-----GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTA 519599
Query 80385 CAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGC 80444
| ||| | ||||||||||| || ||||||| |||||||||||| || ||
Sbjct 519600 GATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGC 519659
Query 80445 CGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTC 80501
|| ||||| || ||| || || || || ||||| |||||||| ||| | |||
Sbjct 519660 GGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTT 519719
Query 80502 GCGCAAATCTGACCAAAAATC----AACCCCAACGCTGTGAC-CCCACATGTCGTGCTGC 80556
| || || | ||| || | || | | ||||| |||||||||||| ||||
Sbjct 519720 GAGC---TCGGCCCAG---TCCCAGAGGTCCGAGGGGGTGACGCCCACATGTCGTACTGC 519773
Query 80557 AAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCC 80616
| |||| ||| || || || || ||| | |||||||| | ||| | | || |||
Sbjct 519774 AGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCC 519833
Query 80617 AGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACA 80676
||||| ||||| | || || ||||| || ||| ||| |||| | ||| | |
Sbjct 519834 AGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGA 519893
Query 80677 CCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCC 80736
| || |||| || || || | ||||||| |||||||| |||| || || |||
Sbjct 519894 CGACGAGCCTCGGGAGACTCAAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCC 519953
Query 80737 TGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGG 80796
|| || ||||| |||| || ||||||||| |||| ||||| ||||||| | |||
Sbjct 519954 TGGACACCGATACCGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGG 520013
Query 80797 TAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA-ACATCATG 80855
|| |||| | ||||||| ||| ||||| | || | || || || || ||
Sbjct 520014 TAGTAGTTGATGTCGATGATCTTGTTAAGGTT-CTTGCAGATGGCCTTGGCGACCTCGTG 520072
Query 80856 AAGTTTCTGAAAGTCGAA----TTGGTTCCCCT-TC-ACAAATGCCGGAAGGCTCAGGGA 80909
|| | |||||| | |||| | || | || | || ||| | ||
Sbjct 520073 CAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGA 520132
Query 80910 CGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAA 80969
|||| ||||| || |||||||| || | | | |||||| || || ||||||||
Sbjct 520133 GGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAA 520192
Query 80970 ATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTT 81029
|| || |||| || || || ||||| |||||||| |||| ||| || |||||
Sbjct 520193 GTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTT 520252
Query 81030 GTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTC 81089
|||| ||| | ||| | ||||||||| ||| |||| ||||||||||| ||| | ||
Sbjct 520253 GTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTT 520312
Query 81090 GCGCGCCTTGACCAC---CTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146
| |||||||| |||| | | ||| |||||| | || |||| | |
Sbjct 520313 CTGGGCCTTGACGGTGCGCTTG--GCACG-GCCCTCGGCCTCGTAGCGCTCGTA-GAGGC 520368
Query 81147 G-TCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204
| || |||| | | |||| | ||| ||| |||| | ||||||||||| |||||||| ||
Sbjct 520369 GCTCAAACTCGTCGCCGTAGCAGT-CAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGC 520427
Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264
||||||| || | ||| || ||||||||| || || | |||||| ||| |
Sbjct 520428 GACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAG 520487
Query 81265 AACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324
|| || || ||| ||| ||||||| | || ||||| ||| | ||||| || ||
Sbjct 520488 AAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCA 520547
Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------G 81378
| || ||||| ||||||||||| | || | ||| | | || | |||| |
Sbjct 520548 AAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACC---GGGACGCTTGTTG 520604
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
|||||||||| |||||| ||||| || ||| || || || | ||| || | ||||||
Sbjct 520605 CCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG 520664
Query 81439 T--CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG 81496
| ||||| |||||| ||||| | || || || || |||| | | |||
Sbjct 520665 TTGCTGAC--ACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGT 520722
Query 81497 AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556
|| ||||| ||||| | ||| || ||| |||||| || | || || || |
Sbjct 520723 TGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGA 520782
Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616
| || ||||| || | |||||| | | ||| || || | |||||||
Sbjct 520783 TGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCG 520842
Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676
| || || ||||| || || |||| ||||| | || || | ||||| ||||
Sbjct 520843 GGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGT 520902
Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
||||| || || ||| || || | ||||| ||||||| || |||||||| |
Sbjct 520903 TGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGA 520962
Query 81737 ACATGTACTGGGG 81749
||||| ||||||
Sbjct 520963 GCATGTGCTGGGG 520975
>seq11
Length=790822
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||||||||||||||| || |||||||| ||||| || || || |||||
Sbjct 631966 ATGCAAATCTTTGTCAAGACGCTCACGGGCAAGACCATTACGCTCGATGTCGAGTCCTCG 632025
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||||| || || |||||||||||||| || ||||| ||||||
Sbjct 632026 GATACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 632085
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || |||||||||||||| || ||||||| ||| || || | ||||| ||
Sbjct 632086 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACTCTTTCGGACTACAAC 632145
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||| | || || ||| | ||||| || || ||
Sbjct 632146 ATTCAGAAGGAGAGCACCTTGCACCTCGTCCTCCGTCTGCGTGGCGG 632192
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || ||||| ||||| || || || ||||| |||||
Sbjct 631510 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 631569
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||||| || ||||| ||||||||||| || || || || |||
Sbjct 631570 GACACTATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAG 631629
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || ||||| || ||||| || ||||| | || ||||| | || || ||
Sbjct 631630 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTACAAC 631689
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| | ||||| || |||||
Sbjct 631690 ATCCAGAAGGAGTCGACCCTCCACCTGGTCCTCCGTCTCCGTGGTGG 631736
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||||||||| || || ||||| || || || ||||| |||||
Sbjct 631738 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACGATCACACTGGAGGTCGAGTCTTCG 631797
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| |||| || || || |||||||||||||| || || || ||||||
Sbjct 631798 GACACGATCGACAATGTGAAAGCCAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAG 631857
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| ||||||||||| |||||||| | ||||| || | ||||| ||
Sbjct 631858 CAGCGACTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACTCTCTCCGACTACAAC 631917
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||| | || || ||| | || | ||||| ||
Sbjct 631918 ATTCAGAAGGAGAGCACGTTGCACCTTGTCCTTCGATTGCGCGGAGG 631964
>seq17
Length=605135
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||||| || || || ||||| ||||| |
Sbjct 222171 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 222112
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || || |||||||| || || || || || |||
Sbjct 222111 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 222052
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| |||||||| | || || || | ||||| ||
Sbjct 222051 CAGCGACTTATCTTTGCAGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAAC 221992
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | || |||||||| || || ||
Sbjct 221991 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGCGTCTCCGTGGAGG 221945
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || ||||| || ||||| ||||| |||||
Sbjct 300241 ATGCAGATCTTCGTTAAGACCCTCACGGGTAAGACCATCACTCTCGAGGTCGAGTCTTCG 300182
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || || |||||||||||||| || || || ||||||
Sbjct 300181 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 300122
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||||||||| || ||||| | | ||||| | ||||| ||
Sbjct 300121 CAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGACGGCCACACCCTTTCGGACTACAAC 300062
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | || | || || || |||||
Sbjct 300061 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 300015
>seq1
Length=2009762
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| ||||| || ||||| ||||| || | ||| ||| | |||||
Sbjct 1808405 ACAGGTAAGACCATTACCCTCGAGGTGGAGTCCTCGGACACCATCAACAATGTCAAGGCC 1808464
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| || || || ||||||||||| || || || || || |||
Sbjct 1808465 AAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAG 1808524
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||| | || || || | ||||| || |||| ||||| || ||||| ||
Sbjct 1808525 CAGCTCGAGGACGGCCGCACGCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTCCAC 1808584
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||| || |||||
Sbjct 1808585 CTTGTCCTCCGTCTGCGTGGTGG 1808607
>seq8
Length=837966
Score = 111 bits (122), Expect = 2e-19
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774
||||||||| || |||||| || ||||| || ||||| || || || ||| || |
Sbjct 244777 AGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCA 244836
Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834
| |||||||| || ||||| || || ||||| ||||| | || || |||||||| ||||
Sbjct 244837 TCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCT 244896
Query 64835 CTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG 64890
| || ||||| || || ||| || ||||| ||| |||||||||||||||
Sbjct 244897 CGCGCGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCAGCCACCTCAAG 244952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310207520240
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