Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq11 111 1e-19
>seq11
Length=790822
Score = 111 bits (122), Expect = 1e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| ||||| || |||||| || ||||| ||||| ||||| || ||
Sbjct 631727 AGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGG 631668
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || || |||||||| || | |||||| || || || || | ||||||
Sbjct 631667 CCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCC 631608
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| || | || ||| | || ||||| |||||| || | |||
Sbjct 631607 TTGTCT-TGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGT 631549
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||| |||||||| | || || ||||| |||||||||
Sbjct 631548 GATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 631509
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 34510 GTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCG 34569
||||||||||| |||||||| || || || || || || |||| || || || |||||
Sbjct 631934 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCA 631875
Query 34570 GCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTT 34629
|| || || | ||||| ||||| ||||| | ||||||||||| |||| || | |||
Sbjct 631874 GCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATC-TTGGCTTT 631816
Query 34630 AACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGT 34688
|| | || ||||| ||| || |||| || ||||| || || || | |||
Sbjct 631815 CACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGT 631756
Query 34689 TTTCACAAAAATCTGCAT 34706
|| || |||||||||||
Sbjct 631755 CTTGACGAAAATCTGCAT 631738
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 34510 GTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCG 34569
||||||||||| |||||||| || || ||||| || || | || || || || |||||
Sbjct 632162 GTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGCTTACCA 632103
Query 34570 GCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTT 34629
||||| || || ||||| ||||| || || | ||||||||||| |||| || | ||
Sbjct 632102 GCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATC-TTGGCCTT 632044
Query 34630 AACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGT 34688
||| | ||| || || | ||| || || | || || || || || || | |||
Sbjct 632043 GACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGTGAGCGT 631984
Query 34689 TTTCACAAAAATCTGCAT 34706
|| ||||| || |||||
Sbjct 631983 CTTGACAAAGATTTGCAT 631966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729496434291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |