Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 1e-26
>seq1
Length=2009762
Score = 134 bits (148), Expect = 1e-26
Identities = 364/556 (65%), Gaps = 36/556 (6%)
Strand=Plus/Plus
Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAG 34390
|||||||||| |||| || || || || || ||| ||| ||| | | || | | ||
Sbjct 1710610 ATCTGGGACGGCAACGGATCGCGTGAATTCCTCGACTCGCGCGGGCTGTC-TCACCGCAG 1710668
Query 34391 -GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCG 34449
|| |||||||||||||| |||||||| ||||| ||| |||||||||| || |||||
Sbjct 1710669 AGAAGGCGACTTGGGCCCCGTCTACGGTTTCCAATGGCGACACTTTGGCGCAGAGTACAC 1710728
Query 34450 GGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACAC 34509
| |||| | |||| | || || || | || || || | ||||||||||
Sbjct 1710729 AGATTGCGATACCAACTACACCGGTCAAGGCGTCGATCAACTCGCTCAAGTGATCGACAA 1710788
Query 34510 CTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCT 34569
| ||| |||||| ||| | | ||| || | |||| |||||||| ||||| ||
Sbjct 1710789 GATCAAGAACAACCCTACCGACCGTCGCATCCTGCTCAGCGCCTGGAACCCCAAGGACCT 1710848
Query 34570 CCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCGAA----- 34623
| ||||||||||| || |||||||||| | ||| || |||| |||| ||||
Sbjct 1710849 CGAACTGATGGCGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTTCGTCTCGAACCTCG 1710907
Query 34624 -------------TGGGGAG------------CTGTCCTGCCAGCTCTATCAACGATCGG 34658
|| ||| || || || || | || || || ||
Sbjct 1710908 ACGCCTACGCCCGCGGCGAGGGCAAAAAGCACCTCTCGTGTCAAATGTACCAGCGTTCAT 1710967
Query 34659 GAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGA 34718
| || | || || || || ||||||||||||||||| ||||||||| | || |||||||
Sbjct 1710968 GCGATCTCGGTTTGGGCGTTCCGTTCAACATTGCTAGCTACGCTCTGTTGACCTACATGA 1711027
Query 34719 TCGCTCATGTCGTGGGGTTG-GTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCAT 34777
|||| || | | | ||| | ||| || |||||| | |||| ||||||||
Sbjct 1711028 TCGC-CAAGGTGACCGATTGCGAACCTAAAGAATTGGTGCTCGCCATGGGCGATGCGCAC 1711086
Query 34778 ATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTC 34837
||||| | | ||| | || | | | | | ||| || | |||| || | || |||
Sbjct 1711087 GTCTACAAGGATCACGTAGAACCGTTGAAGGTGCAGTTGGAGAGAGATCCTCTGCCCTTC 1711146
Query 34838 CCCCAGCTCAAAATTA 34853
||| ||||||| ||||
Sbjct 1711147 CCCAAGCTCAACATTA 1711162
Score = 134 bits (148), Expect = 1e-26
Identities = 364/556 (65%), Gaps = 36/556 (6%)
Strand=Plus/Minus
Query 6492 TAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGA 6551
|||| ||||||| |||||| || | || |||| | || ||| | | | | | || |
Sbjct 1711162 TAATGTTGAGCTTGGGGAAGGGCAGAGGATCTCTCTCCAACTGCACCTTCAACGGTTCTA 1711103
Query 6552 TGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAAC-CAAC 6610
||| | | ||||| |||||||| |||| | |||||| || ||| | |||
Sbjct 1711102 CGTGATCCTTGTAGACGTGCGCATCGCCCATGGCGAGCACCAATTCTTTAGGTTCGCAAT 1711043
Query 6611 CCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACC 6670
| | | || ||||||||||| || | ||||||||| ||||||||||||||||| ||
Sbjct 1711042 CGGTCACCTTG-GCGATCATGTAGGTCAACAGAGCGTAGCTAGCAATGTTGAACGGAACG 1710984
Query 6671 CCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAG------------CTCC 6718
|| || || | || | || || || || | || || || || |||
Sbjct 1710983 CCCAAACCGAGATCGCATGAACGCTGGTACATTTGACACGAGAGGTGCTTTTTGCCCTCG 1710924
Query 6719 CCA------------------TTCGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGG 6759
|| |||| |||| |||| || ||| | |||||||||| ||
Sbjct 1710923 CCGCGGGCGTAGGCGTCGAGGTTCGAGACGAAGAACTGCGCAAACA-TGTGGCACGGCGG 1710865
Query 6760 GAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATC 6819
||||||||||| ||| ||||| |||||||| |||| | || ||| | | |||
Sbjct 1710864 CAGCGCCATCAGTTCGAGGTCCTTGGGGTTCCAGGCGCTGAGCAGGATGCGACGGTCGGT 1710805
Query 6820 AGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATA 6879
|||||| ||| | |||||||||| | || || || | || || || | ||
Sbjct 1710804 AGGGTTGTTCTTGATCTTGTCGATCACTTGAGCGAGTTGATCGACGCCTTGACCGGTGTA 1710745
Query 6880 GTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGG 6939
|| | |||| | ||||| || |||||||||| ||| ||||| |||||||| ||
Sbjct 1710744 GTTGGTATCGCAATCTGTGTACTCTGCGCCAAAGTGTCGCCATTGGAAACCGTAGACGGG 1710685
Query 6940 GCCCAAGTCGCCCTC-CTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACC 6998
|||||||||||| || || | | || | | ||| ||| ||| || || || || || |
Sbjct 1710684 GCCCAAGTCGCCTTCTCTGCGGTGA-GACAGCCCGCGCGAGTCGAGGAATTCACGCGATC 1710626
Query 6999 CGTGAGCGTCCCAGAT 7014
||| ||||||||||
Sbjct 1710625 CGTTGCCGTCCCAGAT 1710610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262248711440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |