Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 5e-19
>seq8
Length=837966
Score = 109 bits (120), Expect = 5e-19
Identities = 349/537 (65%), Gaps = 11/537 (2%)
Strand=Plus/Minus
Query 4563 TGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|||| ||||||||| | || | || || ||||| || || || | |||||||| | |||
Sbjct 244915 TGCAGACCTTCGTCGC-GCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACC 244857
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
| ||| || ||||| || || | ||| || || || || ||||| |||||||| |||||
Sbjct 244856 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATGCCTTCAACGGC 244797
Query 4682 GGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741
|||||| || || | || |||| | | | ||||| | |||||| | ||
Sbjct 244796 GGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCTGATCCATCGCAGCGC 244737
Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACT 4798
||||| ||||| | ||| ||| || || || | | |||| ||| | | |
Sbjct 244736 CCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGCTCGCG 244677
Query 4799 TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTAT 4858
| || || || |||| || ||||| || || || || | || || || ||
Sbjct 244676 CTGCTC---GGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGAT 244620
Query 4859 ATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918
|| || || ||||| || ||||| ||||| | ||| || | |||| || |||
Sbjct 244619 GTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGCGGCTTGCACCTCGGA 244560
Query 4919 ACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAA 4978
| || | || || | ||| ||||| || |||||||| || || || || || |
Sbjct 244559 GCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAGAAGGCGAG 244500
Query 4979 AACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTT---CCAGTGGGGCAAATC 5035
|| || || ||||||| |||||| || || || || ||||| | | | |||
Sbjct 244499 GACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGATC 244440
Query 5036 TTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
|| | | || | ||||| | ||||| || || || || || |||||||||||
Sbjct 244439 CTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 244383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049459473991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |