Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 4e-16
>seq8
Length=837966
Score = 100 bits (110), Expect = 4e-16
Identities = 332/515 (64%), Gaps = 6/515 (1%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || |||||||||||||| || || || || |||||||| || || | |||
Sbjct 244888 TCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCG 244829
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| |||||||| ||||| ||||| ||| || | ||| || ||
Sbjct 244828 AAGGAGCCGGAGAAGAAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAA 244769
Query 48303 CTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
|||| | || | ||||| || | ||||| || || |||| ||| || ||
Sbjct 244768 GTGGCGCGCTTGTCGCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGG 244709
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419
|| || || | || | |||||| | | | | | || || ||| || ||
Sbjct 244708 ATGGTCTCGACGGCGTCAAAGAGGAGCTCGCGCTGCTCGGGCTCGCGAATGTAGGTGTCG 244649
Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479
|| | || || | || ||||| || || || || ||||| || ||||| ||
Sbjct 244648 ATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 244589
Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539
|| | || || | | || ||||| | | || || || | | ||||| || ||
Sbjct 244588 CAACGAGCCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACG 244529
Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599
|| || || ||| || || || || | || || ||||| | |||||||
Sbjct 244528 ATACCGTCGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCG 244469
Query 48600 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656
| || || || |||||| | || ||| || || | || | ||||| || |||||
Sbjct 244468 TTGAGCTTGTTGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAG 244409
Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
|| || ||||| || ||||| ||||| | ||| ||
Sbjct 244408 AAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 244374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668565549280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |