Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq14 174 2e-38 seq272 116 4e-21 seq22 95.1 1e-14 >seq14 Length=427353 Score = 174 bits (192), Expect = 2e-38 Identities = 374/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| || || ||| ||| | |||||||| | ||| || | ||| ||||| || ||||| Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || ||||||| ||||||||||| ||||| ||||| || ||||| || || |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATG 24310 || || || ||||| |||||||||| || | || | | | ||||| Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 |||||| | ||||| || || || || || || || |||||||| |||| Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATC 83852 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 ||| ||||| | ||||| || || || ||| || || | || ||| | Sbjct 83851 AAACAGATACTGGCGCTCATTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGT 83792 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || | ||| | |||||||| || || || || || || |||| ||| || | || Sbjct 83791 CTCTGCATGGACATTTTCAATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGAT 83732 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 ||| ||||| | |||| || || | | |||||| || ||||| || ||| || || Sbjct 83731 CTGGACTTCGTTGGAAAAACGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGC 83672 Query 24551 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCA 24607 |||||| || || | |||| || || | ||| | || |||||| ||||||| Sbjct 83671 AAAAAAAGCTAAAATATGTGAGATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCA 83612 Query 24608 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 | || ||| | || | ||||| |||||| | |||||||| |||||||| || || Sbjct 83611 GTGCACAATGTCTGTCGAGAGATCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTT 83552 Query 24668 TTTATACATATTCCAGAT 24685 || |||| |||||||| Sbjct 83551 CTTGTACAAGTTCCAGAT 83534 >seq272 Length=43472 Score = 116 bits (128), Expect = 4e-21 Identities = 182/258 (71%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184 ||| | ||| || || |||||| ||| | ||| || || | || || | |||||||| Sbjct 3683 AAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTCGTTGGA 3742 Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244 ||||| |||| ||||| || |||| ||| || ||||| || ||||||||||| || | Sbjct 3743 GAACGTAGGTCCAGGCATCAGACCACACTTCTTCAGCCAGAAGATGGACGCAAAAGAACT 3802 Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG--CG 24302 ||| ||||| || ||||| || || || ||||| | | | || ||| | || || Sbjct 3803 AGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAAGGTGGAACG 3862 Query 24303 CTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361 ||| ||| ||||||||| | ||||| || ||||| || || ||||| || | || Sbjct 3863 CTGATCAGATATCCACTTGAGTGCCCAGTCAGCCTTGCACTTGACGCAAGGAATACTTTC 3922 Query 24362 TATAGCATTAAAGAGATA 24379 || || | |||||| || Sbjct 3923 CATGGCGTCAAAGAGGTA 3940 >seq22 Length=397055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || ||||| | ||| || || |||||| ||| | ||| || || | | || | ||| Sbjct 301480 TGGTTAAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCCGATGAGCTCG 301421 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 ||||| ||||| |||| ||||| || |||||||| || ||||| || ||||||||||| Sbjct 301420 TTGGAGAACGTACGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCAAAA 301361 Query 24240 GATCCAGAAAAGAAAATTCC 24259 || ||||| ||||| || || Sbjct 301360 GAACCAGAGAAGAAGATGCC 301341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593710096644000