Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq47 118 9e-22 seq16 114 1e-20 seq35 89.7 4e-13 seq4 89.7 4e-13 seq284 84.2 2e-11 >seq47 Length=240645 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| |||||||| || ||||||||||| ||| | ||||| || || ||||| Sbjct 28188 GTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTG 28129 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| | ||||| ||||||||||||||||| || |||||||||||| ||| || Sbjct 28128 CTTGCCTGCGAAAATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTT 28069 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | ||| ||||| | || | ||| ||||| || Sbjct 28068 CGCCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGT 28009 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||||||| Sbjct 28008 GAGGGTCTTGACGAAGATCTGCATG 27984 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||||| || || |||||||| ||| | ||| || || |||||||| Sbjct 27960 GTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTG 27901 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| ||||||| || || ||||| || || |||||||||||||| || || Sbjct 27900 CTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTT 27841 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 | || || | |||| |||||| | ||| || || | || | ||| ||||| || Sbjct 27840 TGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGT 27781 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || || ||||||||| || Sbjct 27780 GAGGGTCTTGACGAAGATCTGCATGCCT 27753 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || || |||||||| || |||||| ||||| | ||| ||||| || | Sbjct 28404 CTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAA 28345 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| ||||||||||| || || || |||||||| ||||| ||| || || || | Sbjct 28344 GATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTT 28285 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| ||||| | || | || || || || || || || || Sbjct 28284 GTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGAC 28225 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 28224 GAAGATCTGCAT 28213 >seq16 Length=421267 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | ||| |||||||| | |||||||| || || ||||||||||| Sbjct 331995 CCTCCGCGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCCGAA 332054 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| || || | ||| |||||||| |||| || || |||||||| || || Sbjct 332055 AGCGTGCGACCGTCTTCCAACTGCTTTCCAGCAAAGATAAGGCGTTGCTGATCAGGGGGA 332114 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 ||||| ||||||||| ||||| || || | |||| |||||| | || | || || Sbjct 332115 ATGCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGATGAT-TCCAC 332173 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | || | || || || || || || || ||||||||||||||| || Sbjct 332174 TTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACAAAAATCTGCATGCCT 332225 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA--TCCTCGAGCTGTTTTC 118599 || || || || ||||| |||||||| | | |||| ||| || || | ||| |||| Sbjct 332253 GTGGATTCCTTCTGAATATTGTAATC--TGAGAGTGTGCGGCCGTCTTCCAACTGCTTTC 332310 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 | || ||||||| || || || || ||||| ||||| |||||||| ||| ||| || Sbjct 332311 CGGCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTT 332370 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | |||| ||| || | | ||| || || | || | || || || || || | Sbjct 332371 TCACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGG 332430 Query 118720 TTTTTACAAAAATCTGCATGGCT 118742 | || || |||||||||||| || Sbjct 332431 TCTTAACGAAAATCTGCATGCCT 332453 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | || |||| ||| | ||||| || || || ||||||||||| Sbjct 332451 CCTCCGCGGAGACGTAAGACCAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAT 332510 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || ||||| ||||||||| |||||||||| ||||| |||||||| Sbjct 332511 AGCGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGA 332570 Query 118632 AT 118633 || Sbjct 332571 AT 332572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| ||||| ||||| ||||| | || || ||| || | ||| ||||| ||| | Sbjct 331802 CTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAA 331861 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || || || || || ||||| ||||| |||||||| ||| ||| || || | Sbjct 331862 GATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATT 331921 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||| ||||| | || | || || || || || || || || Sbjct 331922 GTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAAC 331981 Query 118727 AAAAATCTGCATGGCT 118742 ||||||||||||| || Sbjct 331982 AAAAATCTGCATGCCT 331997 >seq35 Length=287174 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| |||||||| || || |||||||| ||||| | ||||| ||| |||||||| Sbjct 76347 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTGCGACCATCTTCGAGCTG 76406 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||||| ||||||||||||| || ||||| || || Sbjct 76407 CTTTCCAGCAAAGATGAGACGCTGTTGGTCGGGGGGAAT 76445 >seq4 Length=631323 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||| |||||||| ||||| | ||| || ||||| Sbjct 303729 ACCAAGTGAAGCGTGGATTCCTTTTGGATGTTGTAGTCGCTAAGAGTACGGCCGTCCTCA 303670 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| ||||||||| |||| ||||||||||| ||||| || || Sbjct 303669 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGAT 303626 >seq284 Length=40064 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | | ||| ||| |||| | |||||||| || || |||||||| ||||| Sbjct 10733 CCTCCACGGAGACGCAAGACCGAGTGAAG-GTAGACTCCTTCTGGATGTTGTAGTCGCTG 10791 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || ||||| ||||||||| || | ||||||||||| || || || Sbjct 10792 AGAGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAGGTAAGACGCTGCTGGTCAGGTGGG 10851 Query 118632 ATG 118634 ||| Sbjct 10852 ATG 10854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433822204672600