Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq14 123 2e-23 seq1189 100 3e-16 seq272 87.8 2e-12 >seq14 Length=427353 Score = 123 bits (136), Expect = 2e-23 Identities = 294/441 (67%), Gaps = 4/441 (1%) Strand=Plus/Minus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||||||||| || |||| || ||||| | ||| || | || || || || || || Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 || ||||||| ||| || ||||| | ||| ||||| | ||||| || || |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 |||||| || ||||| ||||| ||||| | || | | ||| | || Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 16414 tatccattttttagcccaatttgctttttgtttAAC-ACAGTTCATGTTCTCTATTGCAT 16472 ||||||| | ||||| | ||||||| | || || | | | ||| ||||||| |||| Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGT-ATGGTCTCTATGGCAT 83853 Query 16473 TAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACA 16532 ||| | ||| | || ||| || | || || || || | ||| Sbjct 83852 CAAACAGATACTGGCGCTCATTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGG 83793 Query 16533 TTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATA 16592 | |||| ||| | ||| || || ||||| |||||||||||||||| |||||| | | Sbjct 83792 TCTCTGCATGGACATTTTCAATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGA 83733 Query 16593 TTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652 | || ||||| | |||| | || | | |||||||||||||| ||||| || | Sbjct 83732 TCTGGACTTCGTTGGAAAAACGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAG 83673 Query 16653 CAAAAAACGC--AAGTATGTG 16671 ||||||| || || |||||| Sbjct 83672 CAAAAAAAGCTAAAATATGTG 83652 Score = 104 bits (114), Expect = 2e-17 Identities = 363/560 (65%), Gaps = 9/560 (2%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 ||||||||||| |||| || || || | || || | |||||| || || ||||| Sbjct 81656 CAAGCAAAATCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAACGTAAGT 81715 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || || || | ||| || |||| ||||| |||||||| ||||| Sbjct 81716 CCAGGCATCAGACCACGCTTCTTCAACCAGAAGATAGACGCAAAGGAACCAGAGAAGAAG 81775 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 || ||||| || || || || || ||||| |||||||| | || | | | | Sbjct 81776 ATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAATGTGGAACGCTGATCAGAT 81835 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| || ||||| | || || | || || || || | || || || | | Sbjct 81836 ATCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATAGTTTCCATGGCGTCA 81895 Query 16475 AATAAATAAtttttttCTTTGC--TATCTAAAATATAAGTATCTATTAGTAAACTA-TAC 16531 || | || || || || ||| || ||||| || || || || | | || Sbjct 81896 AAGAGGTA--TTCGCGCTGGGCGGAATCCTTGATGTAAGTGTCGATGAG-AAGCGAGTAG 81952 Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGAT 16591 | || || ||||| |||||||| || || || || || ||||| | ||||| | Sbjct 81953 GTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCACCGGGCTTCAGCA 82012 Query 16592 ATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCT 16651 || || ||| | | || | ||| | |||||| || || || |||||| || Sbjct 82013 GCCTGGACCTCATTGGAGAAACGTTCAAGGAGGTTTTCATTGACAATGCCATCGGATGCA 82072 Query 16652 GCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGA--AAGTTTTAAC 16708 || || || || || | |||| || ||||| |||||| || | | | | || | Sbjct 82073 GCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTCGTTGTCATTAAGACGGTTCGTC 82132 Query 16709 CAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCC 16768 |||||| | |||||||| | ||| | ||| || ||||||| || || || | || Sbjct 82133 CAGTCATGGACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCAGAATGATGCTTCGGCT 82192 Query 16769 TTTTTATACATTTTCCATAT 16788 || || ||||||| |||||| Sbjct 82193 TTCTTGTACATTTGCCATAT 82212 >seq1189 Length=1840 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278 ||| ||||| | | ||||||||||| |||| ||||| || | || || | ||| Sbjct 1811 GTGGTTAAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTC 1752 Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338 ||| || || ||||| || ||||| || || || || || | ||| || || | |||| Sbjct 1751 GTTGGAGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCAAG 1692 Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCG 16393 |||||||| ||||| || ||||| || || || || || ||||| ||||||||| Sbjct 1691 AGAACCAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCG 1637 >seq272 Length=43472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 ||||||||||| |||| ||||| || | || || | |||||| || || ||| | Sbjct 3693 CAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTCGTTGGAGAACGTAGGT 3752 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || | || || | ||| || || | ||||| |||| ||| ||||| Sbjct 3753 CCAGGCATCAGACCACACTTCTTCAGCCAGAAGATGGACGCAAAAGAACTAGAGAAGAAG 3812 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC 16392 || ||||| || || || || || ||||| |||||||| Sbjct 3813 ATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACC 3850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462503038830000