Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq47 118 8e-22 seq16 95.1 1e-14 >seq47 Length=240645 Score = 118 bits (130), Expect = 8e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| || ||| |||| ||||| || || || ||||| Sbjct 28176 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTGCCTGCGAA 28117 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || |||||||| | |||||||||||| ||| || ||| || Sbjct 28116 AATGAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCTTGAATCTTCGCCTTCACATT 28057 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||||||||||| || |||||||||||||| || ||||| || Sbjct 28056 GTCGATAGTGTCAGAAGACTCCACCTCCAACGTGATCGTCTTGCCCGTGAGGGTCTTGAC 27997 Query 45325 AAAGATTTGCATG 45337 ||||| |||||| Sbjct 27996 GAAGATCTGCATG 27984 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||| | ||| || |||||||||||||| || ||||| || ||| ||| |||| || Sbjct 28422 TACAAGGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTC 28363 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || |||||||| || |||| ||||| ||||| || || | ||||| |||||| Sbjct 28362 CAACTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTG 28303 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||| || ||| || | | | |||| ||||||||||| || || ||||| Sbjct 28302 AATCTTCGCCTTGACGTTGTCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTT 28243 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| || ||||| ||||| Sbjct 28242 ACCCGTGAGGGTCTTGACGAAGATCTGCAT 28213 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || || |||| || || || Sbjct 27960 GTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCTTCGAGCTG 27901 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | || ||||| || || || | |||||||||||| || || Sbjct 27900 CTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTT 27841 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| |||||| |||| || |||||||||||||| Sbjct 27840 TGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTCTTGCCCGT 27781 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 27780 GAGGGTCTTGACGAAGATCTGCATG 27756 >seq16 Length=421267 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||||||||||| || ||||| || || || ||| | || |||| || Sbjct 331790 GTGAAGGGTGCTCTCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTG 331849 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| ||||| |||| || |||||||| ||||| | || ||||||||| ||| || Sbjct 331850 CTTTCCTGCGAAGATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTT 331909 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | |||| ||||||||||| || || ||||| ||||| Sbjct 331910 TGCCTTCACATTGTCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGT 331969 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||| || |||||| Sbjct 331970 GAGGGTCTTAACAAAAATCTGCATG 331994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395067736782550