Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 145 7e-30 seq1189 109 5e-19 seq16 95.1 1e-14 seq47 84.2 2e-11 >seq14 Length=427353 Score = 145 bits (160), Expect = 7e-30 Identities = 376/566 (66%), Gaps = 19/566 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| || || |||||||| || ||||| | || || | || || Sbjct 82212 ATATGGCAAATGTACAAGAAAGCCGAAGCATCATTCTGGACTGCTGAGGAGATGGATCTC 82153 Query 57630 TCTAAGGATCTGAGCGATTGG--GATTCC-CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || || || | || ||| || | || || || || | ||||| || | Sbjct 82152 TCAAAAGACGTCCATGACTGGACGAACCGTCTTAATGACAACGAACGCCATTTTGTTTCA 82093 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| ||||||||||| ||||| || || || | | ||| | Sbjct 82092 CACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATTGTCAATGAAAACCTCCTTGAACGT 82033 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || || | | || || | ||||| ||||| || ||| | || Sbjct 82032 TTCTCCAATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTCCAAATCATGATG 81973 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || ||||| |||||||| || ||| | ||||| || | Sbjct 81972 GAGAACATTCACTCCGAGACCTACTCGCTTCTCATCGACACTTACATCAAGGATTCCGCC 81913 Query 57867 GAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGC 57922 || || | || | || |||| || ||||| || || || |||| ||||| Sbjct 81912 CAGCG-CGAATACCTCTTTGACGCCATGGAAACTATTCCTTG---CGTCAAGCGCAAGGC 81857 Query 57923 AGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978 || ||| || |||| |||||| | |||| |||| || | ||| | | Sbjct 81856 TGACTGGGCACTCAAGTGGATATCTGATCAGCGTT----CCACATTTGGTGAGCGCTTGG 81801 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| ||||| ||||||||||| || ||||| || || ||||||| | || || ||| Sbjct 81800 TCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCCTTTGCGTCTATCTTCTGGT 81741 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| || || |||||||| || || ||||| ||||||| | || || || | Sbjct 81740 TGAAGAAGCGTGGTCTGATGCCTGGACTTACGTTCTCCAACGAGCTCATCAGCCGTGATG 81681 Query 58099 AGGGTCTCCATACTGATTTTGCGTGC 58124 ||||| | || || |||||||| ||| Sbjct 81680 AGGGTATGCACACCGATTTTGCTTGC 81655 >seq1189 Length=1840 Score = 109 bits (120), Expect = 5e-19 Identities = 304/458 (66%), Gaps = 19/458 (4%) Strand=Plus/Plus Query 57676 ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATT 57735 ||||| || |||||| | || || ||||| ||||||||||| ||||| || || || Sbjct 1349 ATTTTGTTTCACACGTCCTCGCCTTCTTCGCTGCATCCGATGGCATTGTAAATGAAAACC 1408 Query 57736 TGGTCGAAAGATT-TTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTT 57794 | | || | || |||| | || || || | | || || | ||||| ||||| || Sbjct 1409 TCCTTGAGCGTTTCTTCA-ATGAGGTCCAGGCTGCTGAAGCCCGGTGCTTCTACGGCTTC 1467 Query 57795 CAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTG 57854 ||| | || || ||| | || || || | | || || |||||||| || ||| | Sbjct 1468 CAAATCATGATGGAGAACATTCACTCCGAGACCAACTCACTTCTCATCGACACTTACATC 1527 Query 57855 AAGGACAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGC 57913 ||||| || | || || | || | || |||| || ||||| || || || Sbjct 1528 AAGGATTCCGCC-AGCG-CGAATACCTCTTTGACGCCATGGAAACTATTCCTTG---CGT 1582 Query 57914 CAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCG 57966 |||| ||||| || ||| || |||| ||| || | |||| |||| |||| Sbjct 1583 CAAGCGCAAGGCTGACTGGGCACTCAAGTGGGTATCTGATCAGCGTT----CCACCTTCG 1638 Query 57967 CCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGG 58026 ||| | | |||| ||||| ||||||||||| || ||||| || || ||||| Sbjct 1639 GTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCTGGTTCTCTTGCGT 1698 Query 58027 CAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGA 58086 | || || ||| ||||||| || || |||||||| || || ||||| ||||||| | | Sbjct 1699 CCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGACTTACGTTCTCCAACGAGCTCA 1758 Query 58087 TATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGC 58124 | || || || ||| | || | |||||||| ||| Sbjct 1759 TCAGCCGTGATGAAGGTATGCACATCGATTTTGCTTGC 1796 >seq16 Length=421267 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| || || || || || ||||| | || || ||| | || Sbjct 332222 CATGCAGATTTTTGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAAGTGGAATCATC 332163 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || ||| |||||||||||| | || || || || Sbjct 332162 CGACACCATCGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGCATTCCCCCTGATCA 332103 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || || || || ||||| || |||||||||||| | || | ||||| || Sbjct 332102 GCAACGCCTTATCTTTGCTGGAAAGCAGTTGGAAGACGGTCGCACGCTTTCGGATTACAA 332043 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || || || ||||| |||| Sbjct 332042 CATCCAGAAGGAGTCTACGCTTCACTTGGT 332013 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| || || || || || ||||| | || || || | || Sbjct 331994 CATGCAGATTTTTGTTAAGACCCTCACGGGGAAGACCATCACTTTGGAGGTGGAGTCATC 331935 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| | |||| | || || || ||| | ||||||||||||| | || || |||| Sbjct 331934 CGACACTATCGACAATGTGAAGGCAAAGATTCA-GGACAAGGAAGGCATTCCTCCTGACC 331876 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | || || || || ||||| || || ||||||||||| | || | ||||||| Sbjct 331875 AACAACGCCTGATCTTCGCAGGAAAGCAGTTGGAAGATGGTCGTACGCTCTCTGATTATA 331816 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||| ||||| || || ||||| || || ||| Sbjct 331815 ACATCCAAAAGGAGAGCACCCTTCACCTTGTTCTT 331781 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || || || || || ||||| | || || || | || Sbjct 332450 CATGCAGATTTTCGTTAAGACCCTCACGGGGAAGACCATCACGTTGGAAGTAGAGTCCTC 332391 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | |||| | || ||| || ||| | ||||||||||||| | || || |||| Sbjct 332390 CGATACCATCGACAACGTGAAAGCAAAGATTCA-GGACAAGGAAGGCATTCCTCCTGACC 332332 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTA 31368 | || || || || || || || || |||||||||||| | ||| | | ||||| Sbjct 332331 AACAACGCCTCATCTTTGCCGGAAAGCAGTTGGAAGACGGCCGCACACTCTCA--GATTA 332274 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || ||||| || ||||| || || || Sbjct 332273 CAATATTCAGAAGGAATCCACCCTTCACCTCGTTCT 332238 >seq47 Length=240645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || || || |||| Sbjct 28213 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACAATCACATTGGAGGTGGAGTCGTCA 28272 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || |||||| || ||| | || || |||||| Sbjct 28273 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAAGAGGGCATTCCACCAGACCAG 28332 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || || || || || |||||||| ||| Sbjct 28333 CAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGAC 28368 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| |||||||| | || || || | || Sbjct 27756 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGTTGGAAGTGGAGTCATC 27815 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | ||||||||| ||| | || || || | Sbjct 27816 TGACACCATCGACAACGTGAAGGCAAAGA-TCCAGGACAAGGAGGGCATTCCCCCTGATC 27874 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 | || || || || ||||||||||| ||| | |||||| ||| | ||| || | Sbjct 27875 AACAACGACTCATCTTCGCTGGCAAGCAGCTCGAAGACGGACGTACTCTTTCCGACTACA 27934 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || || || || || || || Sbjct 27935 ACATCCAGAAGGAGTCCACACTCCACCTTGTTCT 27968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445757763276000