Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq14 201 2e-46 seq272 152 7e-32 seq22 109 8e-19 >seq14 Length=427353 Score = 201 bits (222), Expect = 2e-46 Identities = 380/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||| ||||| |||||||| | ||| || ||||| ||||| || ||||| Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||||| ||||||||||| ||||| ||||| || ||||| || || |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135 || || || ||||| ||||||||||| || | || | | | | ||||| Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 |||||| | ||||| || || || || || || || || |||||||||| Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATC 83852 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||| ||||| | ||||| || || || || ||||| | || ||| | Sbjct 83851 AAACAGATACTGGCGCTCATTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGT 83792 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || | ||| | |||||||| ||||| || || || || |||| ||| || | || Sbjct 83791 CTCTGCATGGACATTTTCAATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGAT 83732 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| ||||| | |||| || ||| | | |||||| || ||||| || ||| || || Sbjct 83731 CTGGACTTCGTTGGAAAAACGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGC 83672 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATTCCA 50432 |||||| || || | |||| || || || ||| || | |||||| ||||||| Sbjct 83671 AAAAAAAGCTAAAATATGTGAGATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCA 83612 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 | || ||| | || | ||| | |||||| | |||||||| |||||||| || || Sbjct 83611 GTGCACAATGTCTGTCGAGAGATCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTT 83552 Query 50493 TTTATACATATTCCAGAT 50510 || |||| |||||||| Sbjct 83551 CTTGTACAAGTTCCAGAT 83534 >seq272 Length=43472 Score = 152 bits (168), Expect = 7e-32 Identities = 190/258 (74%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||| | ||| || || |||||| ||||| ||| || || | || || || |||||||| Sbjct 3683 AAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCTGATGAGCTCGTTGGA 3742 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 ||||| |||| ||||| || |||| ||| || ||||| || ||||||||||| || | Sbjct 3743 GAACGTAGGTCCAGGCATCAGACCACACTTCTTCAGCCAGAAGATGGACGCAAAAGAACT 3802 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CG 50127 ||| |||||||| ||||| || || || ||||| || | | ||| ||| | ||| || Sbjct 3803 AGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAAGGTGGAACG 3862 Query 50128 CTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 ||| ||| ||||||||| | ||||| || ||||| || || ||||| || |||| Sbjct 3863 CTGATCAGATATCCACTTGAGTGCCCAGTCAGCCTTGCACTTGACGCAAGGAATACTTTC 3922 Query 50187 TATGGCATTAAAGAGATA 50204 ||||| | |||||| || Sbjct 3923 CATGGCGTCAAAGAGGTA 3940 >seq22 Length=397055 Score = 109 bits (120), Expect = 8e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 || ||||| | ||| || || |||||| ||||| ||| || || | | || || ||| Sbjct 301480 TGGTTAAAGAGCAAGCAAGCAAAATCGATGTGCATACCTTCATCACGGCCGATGAGCTCG 301421 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 ||||| ||||| |||| ||||| || |||||||| || ||||| || ||||||||||| Sbjct 301420 TTGGAGAACGTACGTCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGACGCAAAA 301361 Query 50065 GACCCAGAAAAGAAGATTCC 50084 || ||||| |||||||| || Sbjct 301360 GAACCAGAGAAGAAGATGCC 301341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718254883542000