Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14 183 4e-41 seq78 84.2 3e-11 >seq14 Length=427353 Score = 183 bits (202), Expect = 4e-41 Identities = 389/577 (67%), Gaps = 8/577 (1%) Strand=Plus/Plus Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 |||| | ||| || || |||||| ||||| ||||||||| | || || | ||||||| Sbjct 81645 TAAAGAGCAAGCAAGCAAAATCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGG 81704 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173 | ||||| ||||| ||||| || |||||||| || | ||| || ||||||||||| || | Sbjct 81705 AGAACGTAAGTCCAGGCATCAGACCACGCTTCTTCAACCAGAAGATAGACGCAAAGGAAC 81764 Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG--C 42231 |||| |||||||| ||||| || || || ||||| | | | ||| ||| | || | Sbjct 81765 CAGAGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACCAAGCGCTCACCAAATGTGGAAC 81824 Query 42232 ACTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 ||| ||| ||||||||| | ||||| || ||||| || || ||||| || |||| Sbjct 81825 GCTGATCAGATATCCACTTGAGTGCCCAGTCAGCCTTGCGCTTGACGCAAGGAATAGTTT 81884 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | ||||| | |||||| || | | ||| || | || || ||||| | || Sbjct 81885 CCATGGCGTCAAAGAGGTATTCGCGCTGGGCGGAATCCTTGATGTAAGTGTCGATGAGAA 81944 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | || | || || |||||||| || || || || || |||||||| || | || Sbjct 81945 GCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCACCGGG 82004 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 | || | | |||| || || | | || |||||| | ||||| || || || || | Sbjct 82005 CTTCAGCAGCCTGGACCTCATTGGAGAAACGTTCAAGGAGGTTTTCATTGACAATGCCAT 82064 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA-- 42528 | || || || || || | || ||| | ||||| ||||| | |||| Sbjct 82065 CGGATGCAGCGAAGAAGGCGAGGACGTGTGAAACAAAATGGCGTTCGT-TGTCATTAAGA 82123 Query 42529 --TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGAT 42586 || |||| |||| || ||||| || | ||| | || || | ||||| |||||| Sbjct 82124 CGGTTCGTCCAGTCATGGACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCAGAATGAT 82183 Query 42587 GCTTCTGCCTTTTTATACATATTCCAGATATCATGAT 42623 ||||| || || || ||||| | ||| || | |||| Sbjct 82184 GCTTCGGCTTTCTTGTACATTTGCCATATCTGGTGAT 82220 Score = 168 bits (186), Expect = 9e-37 Identities = 373/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||| ||||| ||||| || | ||| || | ||| ||||| || ||||| Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||||| ||||||||||| ||||| ||||| || ||||| || || |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 42240 || || || ||||| |||||||||| || | || | | | ||||| Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||||| | ||||| || || || || || || || || |||||||||| Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATC 83852 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||| ||||| | ||||| || || || ||| ||||| | || ||| | Sbjct 83851 AAACAGATACTGGCGCTCATTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGT 83792 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 |||| ||| | |||||||| ||||| || || || || |||| || || | | Sbjct 83791 CTCTGCATGGACATTTTCAATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGAT 83732 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| ||||| | |||| || ||| | | ||||||||| ||||| || ||| || || Sbjct 83731 CTGGACTTCGTTGGAAAAACGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGC 83672 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCCA 42537 |||||| || || | |||| || || | ||| | | |||| | ||||||| Sbjct 83671 AAAAAAAGCTAAAATATGTGAGATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCA 83612 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 | || ||| | || | ||| | |||||| | |||||||| ||||| || || || Sbjct 83611 GTGCACAATGTCTGTCGAGAGATCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTT 83552 Query 42598 TTTATACATATTCCAGAT 42615 || |||| |||||||| Sbjct 83551 CTTGTACAAGTTCCAGAT 83534 >seq78 Length=184271 Score = 84.2 bits (92), Expect = 3e-11 Identities = 189/276 (68%), Gaps = 11/276 (4%) Strand=Plus/Plus Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890 || || | |||||||||||| || ||||| || |||| || || || ||||||||| Sbjct 132467 GTGCGCAAATAGTACATGCCAGTCTTTAGGCCTTTCTTCCAGCCATAGAAGTGCATACTC 132526 Query 70891 GTTAGTTTGGAATA-GCTAGGATCGGCT--ATGTGAATATTCATCGACTGACTTTGATCG 70947 ||||| |||| || | |||| || || | |||||| |||| ||||| || Sbjct 132527 GTTAG-TTGGCCTATGGTAGG--CGACTGCAAGTGAATGTTCAAACTTTGACTCTGGCAA 132583 Query 70948 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 71007 ||||| ||||| | ||| ||||| | | |||| | |||| || | || ||||||| Sbjct 132584 ATGAATGCTCCACGGTCGGCAGCGAGGTCGATGACCTTCTTCTGCGAGATCTCCCAAACT 132643 Query 71008 GTTTTATAAACTCGC-TTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACC 71063 ||||| |||| | || || ||||| | ||| | | | | | || | || ||| Sbjct 132644 GTTTTGTAAA-TGGCTTTGATATCATTTGGTATGCTGGGGATGTTGGCGACAGAGCCATT 132702 Query 71064 ATCTGCAATAATCCTATTTTTGATCTCTTCATTCCA 71099 || || |||||| |||| || || || |||||||| Sbjct 132703 ATGAGCGATAATCATATTCTTCATGTCGTCATTCCA 132738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671126196678000