Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16 134 3e-26 seq47 107 4e-18 seq14 95.1 3e-14 >seq16 Length=421267 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| || || || || || | |||||||| | || ||||| Sbjct 332253 GTGGATTCCTTCTGAATATTGTAATCTGAGAGTGTGCGGCCGTCTTCCAACTGCTTTCCG 332312 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 332313 GCAAAGATGAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCTTTC 332372 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||||||| | ||||| || | || || ||||| || || || || Sbjct 332373 ACGTTGTCGATGGTATCGGAGGACTCTACTTCCAACGTGATGGTCTTCCCCGTGAGGGTC 332432 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 332433 TTAACGAAAATCTGCAT 332449 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || || || ||||| ||||| || || | ||| ||||| | || ||||| || || Sbjct 331803 TCCTTTTGGATGTTATAATCAGAGAGCGTACGACCATCTTCCAACTGCTTTCCTGCGAAG 331862 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||||| |||||||| || ||||| || |||||||||||||| || ||||| Sbjct 331863 ATCAGGCGTTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTG 331922 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || ||| | || ||||| | || || ||||| || || || || || ||| Sbjct 331923 TCGATAGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTCCCCGTGAGGGTCTTAACA 331982 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 331983 AAAATCTGCAT 331993 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || || || || || || | ||||||||| | || |||||| Sbjct 332025 GTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTGCGACCGTCTTCCAACTGCTTTCCA 332084 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || |||||||| || || ||||| || || || || || || || Sbjct 332085 GCAAAGATAAGGCGTTGCTGATCAGGGGGAATGCCTTCCTTGTCTTGGATTTTCGCCTTC 332144 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | ||| || || | || || |||||||| || || || Sbjct 332145 ACGTTGTCGATGGTGTCGGATGATTCCACTTCCAACGTGATGGTCTTACCCGTGAGGGTC 332204 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 332205 TTGACAAAAATCTGCAT 332221 >seq47 Length=240645 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | ||| || || ||||| || || ||||| || ||||| | |||||| Sbjct 27968 AGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGTCCGTCT 27909 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || || | ||||||||||| || || || || || ||| Sbjct 27908 TCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGTTGATCAGGGGGAATGCCCTCCTTGTCC 27849 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || |||||||| || || || || | ||| || | || || || | || || ||| Sbjct 27848 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACTTCCAACGTGATCGTC 27789 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 27788 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 27757 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||| || || || || || | ||||| || | || ||||| ||||| Sbjct 28403 TCCTTCTGGATATTGTAATCCGACAGCGTGCGCCCGTCCTCCAACTGCTTTCCGGCAAAG 28344 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || || || || || || ||||| ||||||||||| || || || || Sbjct 28343 ATCAGACGCTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGAATCTTCGCCTTGACGTTG 28284 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || | || ||||| | ||| || |||||||| || || || || || Sbjct 28283 TCGATGGTGTCTGACGACTCCACCTCCAATGTGATTGTCTTACCCGTGAGGGTCTTGACG 28224 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 28223 AAGATCTGCAT 28213 >seq14 Length=427353 Score = 95.1 bits (104), Expect = 3e-14 Identities = 275/421 (65%), Gaps = 3/421 (1%) Strand=Plus/Minus Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 ||||| || || || ||||| || | || |||| | ||||| ||| | ||||| Sbjct 82065 GATGGCATTGTCAATGAAAACCTCCTTGAACGTTTCTCCAATGAGGTCCAGGCTGCTGAA 82006 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 ||| | || || ||||| ||||| || || || || ||||| || |||| ||| Sbjct 82005 GCCCGGTGCTTCTACGGCTTCCAAATCATGATGGAGAACATTCACTCCGAGACCTACTCG 81946 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATG 269056 || | || || ||||| || | ||| | | | || || ||| | ||| Sbjct 81945 CTTCTCATCGACACTTACATCAAGGATTCCGCCCAGCGCGAATACCTCTTTGACGCCATG 81886 Query 269057 AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AG 269115 |||||| || || | || |||| ||||| || || |||||| ||| || Sbjct 81885 GAAACTATTCCTTGCGTCAAGCGCAAGGCTGACTGGGCACTCAAGTGGATATCTGATCAG 81826 Query 269116 CGCGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCG 269173 || || | || || | || || || || || || || ||||| || ||||| || Sbjct 81825 CGTTCCACATTTGGTGAGCGCTTGGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCTCT 81766 Query 269174 GGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTC 269233 || || ||||| ||||||| ||||||||||| | || || ||||| ||| | || ||| Sbjct 81765 GGTTCCTTTGCGTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGACTTACGTTC 81706 Query 269234 TCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTT 269293 || ||||| | || ||| | || || ||| | ||| ||| || ||||| || | ||| Sbjct 81705 TCCAACGAGCTCATCAGCCGTGATGAGGGTATGCACACCGATTTTGCTTGCTTGCTCTTT 81646 Query 269294 A 269294 | Sbjct 81645 A 81645 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/250 (69%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 268743 TGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT 268802 ||||||| | || | || ||||||||||||| |||||| | ||||| || ||| Sbjct 83544 TGTACAAGAAAGCGGAGGCATCTTTTTGGACTGCCGAAGAAATGGATCTCTCGACAGACA 83603 Query 268803 TAATAGATTGGAAAAATTTAA-AAC--CAGAAGAAAGAAGATTTATATCTTATATTCTTG 268859 | | | ||||| | | ||| || | ||| | || || || ||||| | | Sbjct 83604 TTGTGCACTGGAATACCCGACTAACTGCAAATGAACGCCACTTCATCTCACATATTTTAG 83663 Query 268860 CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAA- 268918 | |||||||| | |||||| || |||||||||||||| || ||| ||| | ||| Sbjct 83664 CTTTTTTTGCTGCGTCTGATGGCATAGTTAACGAAAATCTGGTTGAG-CGTTTTTCCAAC 83722 Query 268919 GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATT 268978 || || ||||| || ||||| |||| ||||| || |||||||| || |||||| | Sbjct 83723 GAAGTCCAGATCCCAGAAGCTCGATGCTTTTATGGTTTCCAGATCATGATTGAAAATGTC 83782 Query 268979 CATTCAGAGA 268988 ||| |||||| Sbjct 83783 CATGCAGAGA 83792 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 269133 GGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCT 269192 || ||||||| ||||| || || || |||||||||||||| || || ||||| | || | Sbjct 83940 GGCTAGTTGCCTTTGCTGCAGTCGAGGGTATATTCTTTTCCGGCTCGTTTGCATCAATAT 83999 Query 269193 TTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCA 269252 | ||| | || || | || | ||||| || | |||||||| || ||| | || || Sbjct 84000 TCTGGCTCAAAAAGCGTGGATTAATGCCGGGGCTCACTTTCTCCAATGAACTCATCAGTC 84059 Query 269253 GGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 | ||||| || | ||| |||||| |||||| | ||||| || Sbjct 84060 GTGACGAGGGGATGCACACCGACTTTGCTTGTCTTTTATTCAC 84102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151375533947400