Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 7e-15 seq74 91.5 2e-14 seq210 86.0 1e-12 seq10 84.2 3e-12 >seq54 Length=208206 Score = 93.3 bits (102), Expect = 7e-15 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 16465 CATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCG 16524 |||| ||| || || ||||| ||||| |||||||| || ||||||||||| || ||||| Sbjct 135222 CATCTCAGGCATAACAAAGCCTGCTATTCGTCGTCTCGCCCGTCGTGGTGGTGTAAAGCG 135281 Query 16525 TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 | |||| || | |||| || |||| |||| |||| | ||||||||||| Sbjct 135282 TATCTCCGGTCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTCCT 135332 >seq74 Length=180357 Score = 91.5 bits (100), Expect = 2e-14 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| |||||||| || || ||||| || || |||||| |||| || | |||| ||| Sbjct 69907 GCTATTCGTCGTCTTGCCCGCCGTGGAGGGGTGAAGCGTATCTCGGGCCTCATCTACGAA 69966 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| ||||| |||||||||||||||||| ||| ||| Sbjct 69967 GAGACTCGTGGTGTTTTGAAGATCTTCCTTGAGAACGT 70004 >seq210 Length=62376 Score = 86.0 bits (94), Expect = 1e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || || || |||||||||||||| || |||||||| || ||||||||| | || Sbjct 3316 AGGTATAACAAAACCTGCTATCCGTCGTCTTGCCCGTCGTGGCGGTGTCAAGCGTATTTC 3257 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| | |||| || |||| |||| ||| | ||||||||||| Sbjct 3256 TGGTCTTATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTCCT 3212 >seq10 Length=518378 Score = 84.2 bits (92), Expect = 3e-12 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| || ||||| |||||||| || ||||||||| |||| || | | || ||| Sbjct 30942 GCTATCCGACGCCTGGCACGTCGTGGAGGTGTCAAGCGTATCTCCGGTCTTATTTACGAA 31001 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA-TGCTTTCCACTA 16605 |||| ||| | ||| | ||||||||||| ||| || || | ||| | | || | || Sbjct 31002 GAGACTCGAGGTGTGCTCAAGATCTTCCTTGAGAATGTCATTCGTGACTCCGTTAC-TTA 31060 Query 16606 TACCGAGCACGCTAAACG 16623 || ||||| |||||||| Sbjct 31061 CACGGAGCATGCTAAACG 31078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073782824150