Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq30 95.1 2e-14 seq60 91.5 2e-13 >seq30 Length=312077 Score = 95.1 bits (104), Expect = 2e-14 Identities = 237/360 (66%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 |||||||| || |||||||||||| || || || || |||||||||||| |||| ||| Sbjct 95315 GAGATCTACAACCTTGGTGCTCAATCGCACGTCAAGGTGTCCTTTGAGATGTCAGAATAT 95374 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || | ||||||||| | || || || | | ||||| || | || | | || Sbjct 95375 ACCGCCGATGTTGATGGCGTCGGCACCCTGCGTCTCCTTGACGCCATCCGCACCGTTGGC 95434 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 | || ||| | || |||| ||||| || ||| ||||| ||||| || | Sbjct 95435 CTTGAAAAACACACGCGGTTCTACCAGGCTTCGACCTCAGAACTCTATGGAAAGGTCGTC 95494 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | || |||| || ||||| || || | || || || |||||||| || ||| Sbjct 95495 GAAACCCCACAGAGCGAGACCACGCCGTTCTACCCTCGTAGCCCATATGGTGTCGCCAAG 95554 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCT 193946 ||||| | || ||||||| ||| || || ||| | || || | | || | Sbjct 95555 TTGTACGCATACTGGATCACGGTGAACTACCGCGAGGCGTACGGCATGTATGCGTGCAAC 95614 Query 193947 GGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATT 194006 ||||| || ||||||||||| ||| || |||| ||| ||||| || | |||||| Sbjct 95615 GGTATCCTATTCAATCACGAGAGTCCGAGGCGAGGAAGGACGTTTGTCACGAGGAAGATT 95674 >seq60 Length=206367 Score = 91.5 bits (100), Expect = 2e-13 Identities = 243/368 (66%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700 ||| | ||||||||||| || || || ||| ||| || ||||| || || |||||| || Sbjct 28451 CCTTCCGAGATCTATAACCTAGGCGCCCAATCTCACGTCAAAGTCTCATTCGAGATGTCA 28510 Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATG 193760 || || || | |||| |||| | || || || | | || || ||| | || | Sbjct 28511 GAATACACAGCCGATGTAGATGGGCTCGGTACCCTCCGCCTCCTCGACGCAATCCGCACA 28570 Query 193761 TTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGG--TG 193818 | || | |||||| | | | |||| || || || || ||||| ||||| | Sbjct 28571 GTAGGGCTCGAGAAACACGCCAGGTTCTACCAAGCGTCCACTTCAGAACTATATGGAAAG 28630 Query 193819 GTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTG 193878 || || || | | ||| | | ||||| || || || |||| ||| ||||| |||| Sbjct 28631 GTTGTCGAGACGCCCCA-GAGC-GAAACAACTCCGTTCTATCCTCGCAGCCCTTACGGTG 28688 Query 193879 TAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACG 193938 | || || | |||| |||||||||| |||||| |||||| ||||||| | | | Sbjct 28689 TCGCCAAACTTTATGCGTATTGGATCACAGTGAATTACCGTGAGGCATATGGCATGTATG 28748 Query 193939 CTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTC 193998 | || || || | |||||||| || || || |||| |||||| || ||| Sbjct 28749 CGTGTAACGGGATCTTGTTCAATCATGAGAGCCCGAGGCGAGGGAGGACATTCGTTACTA 28808 Query 193999 GTAAGATT 194006 | |||||| Sbjct 28809 GGAAGATT 28816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807539553618000