Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Suillus_20brevipes_20[JGI_20Suibr1_202013-02-15] 1,550 sequences; 51,712,595 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq14 192 7e-44 >seq14 Length=427353 Score = 192 bits (212), Expect = 7e-44 Identities = 378/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||| ||||| |||||||| | ||| || ||||| ||||| || ||||| Sbjct 84091 ACAAGCAAAGTCGGTGTGCATCCCCTCGTCACGACTGATGAGTTCATTGGAGAAAGTGAG 84032 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||||| ||||||||||| ||||| ||||| || || || || || |||||||| Sbjct 84031 CCCCGGCATTAATCCACGCTTTTTGAGCCAGAATATTGATGCAAACGAGCCGGAAAAGAA 83972 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATG 33479 || || || |||||||||||||||| || | || | | | ||||| Sbjct 83971 TATACCCTCGACTGCAGCAAAGGCAACTAGCCGAGTGGCAAATGTTGCCTCCTTGTCAGA 83912 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 |||||| | ||||| || || || || || || || || |||||||||| Sbjct 83911 TATCCATCGTAACGCCCAGTCTGCTTTTCGCTTGACGGCCGGTATGGTCTCTATGGCATC 83852 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||| ||||| | ||||| || || || || ||||| | || ||| | Sbjct 83851 AAACAGATACTGGCGCTCATTGACGTCCTTGACGAGTGTGTCGATAAGGAGCGAATAGGT 83792 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || | ||| | |||||||| ||||| || || || || |||| ||| || | || Sbjct 83791 CTCTGCATGGACATTTTCAATCATGATCTGGAAACCATAAAAGCATCGAGCTTCTGGGAT 83732 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| ||||| | |||| || || ||| |||||| || ||||| || ||| || || Sbjct 83731 CTGGACTTCGTTGGAAAAACGCTCAACCAGATTTTCGTTAACTATGCCATCAGACGCAGC 83672 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCA 33776 |||||| || || | |||| || || | ||| | || |||||| ||||||| Sbjct 83671 AAAAAAAGCTAAAATATGTGAGATGAAGTGGCGTTCATTTGCAGTTAGTCGGGTATTCCA 83612 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 | || ||| | || | ||| | |||||| | |||||||| |||||||| || || Sbjct 83611 GTGCACAATGTCTGTCGAGAGATCCATTTCTTCGGCAGTCCAAAAAGATGCCTCCGCTTT 83552 Query 33837 TTTATACATGTTCCAGAT 33854 || |||| ||||||||| Sbjct 83551 CTTGTACAAGTTCCAGAT 83534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622935130398000